Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32211
(444 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 93 2e-20
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 50 2e-07
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 50 2e-07
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 46 3e-06
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 39 3e-04
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 33 0.026
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 31 0.080
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 27 1.3
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 25 4.0
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 25 4.0
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 25 5.2
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 6.9
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 24 9.1
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 24 9.1
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 24 9.1
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 24 9.1
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 24 9.1
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 24 9.1
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 24 9.1
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 24 9.1
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 24 9.1
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 24 9.1
SPAC25B8.10 |||trans-aconitate 3-methyltransferase |Schizosaccha... 24 9.1
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 24 9.1
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 24 9.1
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 93.1 bits (221), Expect = 2e-20
Identities = 48/132 (36%), Positives = 77/132 (58%)
Frame = +2
Query: 44 LPPEQIAVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRL 223
L EQIA R+AF FD ++ G+I + + ++R +GQ L+++I EVDAD +G +
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 224 EFPEFVTLAAKFIVEEDAEAMXKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXX 403
+F EF+T+ A+ + + D E +E+REAF+++DK+GNGYI L +
Sbjct: 66 DFTEFLTMMARKMKDTDNE---EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEE 122
Query: 404 XXXXMQEIDTDG 439
++E DTDG
Sbjct: 123 VADMIREADTDG 134
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 50.0 bits (114), Expect = 2e-07
Identities = 33/102 (32%), Positives = 51/102 (50%)
Frame = +2
Query: 53 EQIAVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFP 232
E+I +RK F D N+SGSI + I + P + L VD D G ++F
Sbjct: 21 EEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNP----LASRLFSVVDEDGGGDVDFQ 76
Query: 233 EFVTLAAKFIVEEDAEAMXKELREAFRLYDKEGNGYIPTSSL 358
EF+ + F V + E ++L+ AF++YD + +GYI L
Sbjct: 77 EFINSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNGEL 115
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 49.6 bits (113), Expect = 2e-07
Identities = 32/132 (24%), Positives = 59/132 (44%)
Frame = +2
Query: 41 ELPPEQIAVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGR 220
E+ EQ + +AF FD ++ +I + +R +G K + +++ + D G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 221 LEFPEFVTLAAKFIVEEDAEAMXKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXX 400
L+ +FV + + IVE D +E++ AF L+D + G I +LR +
Sbjct: 90 LQMEDFVRVMTEKIVERDP---LEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQ 146
Query: 401 XXXXXMQEIDTD 436
++E D D
Sbjct: 147 ELEAMIEEFDLD 158
Score = 39.1 bits (87), Expect = 3e-04
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +2
Query: 23 TEXWADELPPEQIAVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
TE + P E+I ++AF+ FD + +G I + + + + + + + LE +IEE D
Sbjct: 100 TEKIVERDPLEEI---KRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFD 156
Query: 203 ADKSGRLEFPEFVTL 247
D+ G + EF+ +
Sbjct: 157 LDQDGEINEQEFIAI 171
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 45.6 bits (103), Expect = 3e-06
Identities = 32/130 (24%), Positives = 60/130 (46%)
Frame = +2
Query: 53 EQIAVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFP 232
EQ +++AF +D ++ G IP V +LR +G L +L E+ ++
Sbjct: 6 EQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEK 61
Query: 233 EFVTLAAKFIVEEDAEAMXKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXX 412
+F++ + + E ++E +E +AFR++DK+ +GYI T+ +
Sbjct: 62 KFMSFVSNKLRETESE---EEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQL 118
Query: 413 XMQEIDTDGS 442
+QE D S
Sbjct: 119 MVQEADPTNS 128
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 39.1 bits (87), Expect = 3e-04
Identities = 26/99 (26%), Positives = 49/99 (49%)
Frame = +2
Query: 71 RKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLA 250
++AF FD + +G IP + D+LR GQ N + E I E+++ ++ +F+ +
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQ--NPTLAE--ITEIESTLPAEVDMEQFLQVL 64
Query: 251 AKFIVEEDAEAMXKELREAFRLYDKEGNGYIPTSSLREI 367
+ D +E + F+++DK+ G I LR +
Sbjct: 65 NR-PNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYV 102
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 32.7 bits (71), Expect = 0.026
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +2
Query: 179 EELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMXKELREAFRLYDKEGNGYIPTSSL 358
E + DADK+G ++F EF+ + V E + +L AF+LYD + NG I +
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALS---VTSRGE-LNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 359 REI 367
I
Sbjct: 122 LRI 124
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 31.1 bits (67), Expect = 0.080
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEF 238
++ + +S + V + +M+ + + LEE ++ DAD SG+L F EF
Sbjct: 303 WEKLEKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.1 bits (57), Expect = 1.3
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 290 KELREAFRLYDKEGNGYI 343
+EL+EAF L DK+G+G I
Sbjct: 48 QELKEAFALLDKDGDGNI 65
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 4.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 176 LEELIEEVDADKSGRLEFPEFV 241
+ E I EV+ D SGR+E +FV
Sbjct: 56 VREAIREVNVDSSGRVEPEDFV 77
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 25.4 bits (53), Expect = 4.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 284 MXKELREAFRLYDKEGNGYIPTSSLR 361
M +E EAF L+D GYI LR
Sbjct: 10 MDEEAEEAFDLFDVTHKGYIDFEDLR 35
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 25.0 bits (52), Expect = 5.2
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +2
Query: 167 KKILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMXKELREAFR 313
K++ + E +K+G LEF V+ + +E ++ K++ FR
Sbjct: 397 KELKISRLSESLREKAGLLEFQSSVSEQRDLLYQEQIQSSIKDMENVFR 445
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 24.6 bits (51), Expect = 6.9
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 230 PEFVTLAAKFIVEEDAEAMXKELREAFRLYDKEG 331
PEF AA+ +VEED E + EA + D+EG
Sbjct: 38 PEFSDEAAEALVEEDIEDLD---GEALDVEDEEG 68
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 24.2 bits (50), Expect = 9.1
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 427 DLLHXAIEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQSERFPEFFXHGLS 275
DL AI ++Q+L F +DL + VT+ + +P ++ + +S
Sbjct: 1260 DLDDSAIVSKLNQILSDFRDDLLEHNVRRVTIVGGRINKSAYPSYYTYRVS 1310
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC25B8.10 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 24.2 bits (50), Expect = 9.1
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 26 EXWADELPPEQIAVLRKAFDGFDHNRSGS---IPCDFVADILRMMGQPFNKKILEELIEE 196
E A ++ PE + VLRK F D R+GS IP + + L + Q F+ EE ++E
Sbjct: 65 EIIAVDVYPEMLDVLRKKFPNVD-CRAGSAMAIPLEDESVDLVLCAQCFHWFANEEAMKE 123
Query: 197 V 199
+
Sbjct: 124 I 124
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 80 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVD 202
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,520,334
Number of Sequences: 5004
Number of extensions: 26792
Number of successful extensions: 115
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 162176800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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