Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32203
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BKT2 Cluster: Chromosome undetermined scaffold_112, w...    34   1.7  
UniRef50_A2EQX8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_Q8I1Y8 Cluster: Putative uncharacterized protein PFD020...    32   8.9  
UniRef50_A0DYB9 Cluster: Chromosome undetermined scaffold_7, who...    32   8.9  

>UniRef50_A0BKT2 Cluster: Chromosome undetermined scaffold_112,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_112,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 781

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +3

Query: 243 NIVFSH*NCIISKLTYYTGECFKG*TCDIFNIN-HLCNNYFFIFYQLHYLSF 395
           N++F H  C   K  +Y  + FK    +I +IN +LC+N  F+FY+ H LSF
Sbjct: 170 NLIFKHPYCKYCKKNFYDEDKFKY-HLNIAHINCNLCDNRKFVFYKDH-LSF 219


>UniRef50_A2EQX8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 225

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 341 SSLQQLFFYFLPVTLSVFLSKIKLCINFVNSS 436
           S +QQ++ + L   +SVF+  + +C NF  SS
Sbjct: 135 SEIQQMYIFLLTTLISVFIQAVAICPNFPESS 166


>UniRef50_Q8I1Y8 Cluster: Putative uncharacterized protein PFD0200c;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFD0200c - Plasmodium falciparum
            (isolate 3D7)
          Length = 2249

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +2

Query: 143  FSEEFLS-GLMNAQ-HPKHKNRNVHIQIPYIIITNKHCLLALKLYNLKTYLL--HRRVF 307
            F  +FLS G++N   H +   +N H    Y  I +K+CL   K  N+ T+     +R+F
Sbjct: 2043 FDHKFLSPGMVNINIHDEDIKKNKHYNFVYEEIIHKYCLSIFKKINISTFFKDNEKRIF 2101


>UniRef50_A0DYB9 Cluster: Chromosome undetermined scaffold_7, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_7,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 243

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 264 NCIISKLTYYTGECFKG*TCDIFNINHLCNNYF 362
           NCI+ +  +Y  +C  G  C+ +    +CN  F
Sbjct: 57  NCIVPQCAWYLNKCHDGQQCNYYTDKQICNQIF 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,109,210
Number of Sequences: 1657284
Number of extensions: 8550303
Number of successful extensions: 22755
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22751
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)