Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32203
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   0.70 
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   1.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.1  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 22  IFGKMVDLSAKSNMISATIKSRLTIAIHQYNTILWRTLLPIL 147
           IF +  D+  K      T++    + I  Y+++LW T +P++
Sbjct: 443 IFARWKDILEKPRQ-RGTLEGN-NMGIQPYDSLLWHTWMPVM 482


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = +1

Query: 217 NPLYYYHKQTLSSRIKTV*SQNLLITQESVLKVE 318
           +P +YY+++TL +      + NL  + +++LK +
Sbjct: 106 SPEHYYNQKTLQANNNDASNGNLKFSIDNILKAD 139


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 145 LGRIP*WPY 171
           LGR+P WPY
Sbjct: 323 LGRVPIWPY 331


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 145 LGRIP*WPY 171
           LGR+P WPY
Sbjct: 330 LGRVPIWPY 338


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 45  ISQIQYDLCHHKKSVD 92
           + QIQ+D+C  K+ VD
Sbjct: 204 LDQIQFDICLLKEGVD 219


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 45  ISQIQYDLCHHKKSVD 92
           + QIQ+D+C  K+ VD
Sbjct: 204 LDQIQFDICLLKEGVD 219


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 470 FFFIFIIYLCFDYY 429
           F++ FII LC  Y+
Sbjct: 103 FYYAFIILLCVYYF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,627
Number of Sequences: 336
Number of extensions: 2513
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)