Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32202
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    73   1e-15
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    66   2e-13
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.1  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   4.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   4.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 73.3 bits (172), Expect = 1e-15
 Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
 Frame = -2

Query: 515 HKPFT--VTIDIKSDVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQ 342
           H+PFT  +T++ +S+       ++FL PK DE G P+   D  + F ELD F   +  GQ
Sbjct: 479 HQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFTVNLKQGQ 538

Query: 341 SQITRSSTDFAFFKEDSLPMAEIYKLLD----QGKIPTDMFNSSDT-MPSRLMLPKGTYD 177
           + ITR+S+  +     ++P    ++ LD    QG      FN      P  +++PKGT +
Sbjct: 539 NTITRASSQSSV----TIPFERTFRNLDLNRPQGGEELAQFNFCGCGWPQHMLIPKGTPE 594

Query: 176 GFPFQLFVFVYPYEPTPKESEP-------------FKSVVPDNKPFGYPFDR 60
           G   QLFV +  Y+    +                   + PD +  GYPFDR
Sbjct: 595 GMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLYPDRRSMGYPFDR 646


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
            subunit 1 protein.
          Length = 682

 Score = 65.7 bits (153), Expect = 2e-13
 Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
 Frame = -2

Query: 455  KMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAE 276
            ++FL P++DE G P+   +    F ELD F   +  G + ITR ST+ +     ++P   
Sbjct: 500  RIFLAPQFDERGNPWLFRNQKDMFIELDRFAVSLKQGTNTITRHSTESSL----TIPFER 555

Query: 275  IYKLLDQGKIPT-----DMFNSSDT-MPSRLMLPKGTYDGFPFQLFVFVYPY-------- 138
             ++ LD  + PT       FN      P  ++LPKGT  G+P  LFV +  Y        
Sbjct: 556  TFRNLDANR-PTGGDALSEFNFCGCGWPQHMLLPKGTEAGYPCHLFVMISNYADDRVEQD 614

Query: 137  -EPTPKESEPF----KSVVPDNKPFGYPFDRPVLP-----QYFKQPNMFFKKVLV 3
               T  + + F      + PD +  GYPFDR         Q F  PNM  ++V++
Sbjct: 615  TSGTCSDGDTFCGIKDKLYPDRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 295 SSLKNAKSVDERVI*DWP 348
           S L+NAK VDE ++ + P
Sbjct: 471 SQLRNAKKVDEAILEERP 488


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 193 LRVHTMDSPSSCLY 152
           +R HT + P SC Y
Sbjct: 27  IRTHTGEKPFSCTY 40


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -3

Query: 355 LTLASLR*RVHLLTLHSSKKTLYRWPKSTSSWTKERFLLTCSTPRT 218
           + L++ R   +  T H + K +    + T SWT+       S P+T
Sbjct: 30  IDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEINAFANVSPPKT 75


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 228 VEHVSRNLSLVQELVDFGHR*RVF 299
           V H   N S VQ+L   GH   VF
Sbjct: 225 VSHKYTNYSAVQDLHRRGHEIAVF 248


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 228 VEHVSRNLSLVQELVDFGHR*RVF 299
           V H   N S VQ+L   GH   VF
Sbjct: 232 VSHKYTNYSAVQDLHRRGHEIAVF 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,020
Number of Sequences: 336
Number of extensions: 2488
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)