Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32202
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical ... 31 0.61
At3g03480.1 68416.m00346 transferase family protein similar to h... 31 0.61
At1g10760.1 68414.m01231 starch excess protein (SEX1) identical ... 29 1.9
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 28 3.2
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 28 4.3
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 28 4.3
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 28 4.3
At5g45190.1 68418.m05547 cyclin family protein similar to cyclin... 27 5.7
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 27 7.5
At5g54350.1 68418.m06768 expressed protein ; expression support... 27 9.9
At3g54590.1 68416.m06040 proline-rich extensin-like family prote... 27 9.9
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 27 9.9
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 27 9.9
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 27 9.9
>At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical to
MAP3K epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1368
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 118 DSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELN 234
D +G G+YG N +V + +SLE IV E+LN
Sbjct: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIVQEDLN 62
>At3g03480.1 68416.m00346 transferase family protein similar to
hypersensitivity-related gene GB:CAA64636 [Nicotiana
tabacum]; contains Pfam transferase family domain
PF00248
Length = 454
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -2
Query: 215 MPSRLMLPKGTYDGFPFQLF----VFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 48
M ++ LP+ T G F++ V P +PTP+E +P S + D + G F PV+
Sbjct: 1 MDHQVSLPQSTTTGLSFKVHRQQRELVTPAKPTPRELKPL-SDIDDQQ--GLRFQIPVI- 56
Query: 47 QYFKQPNM 24
+F +PN+
Sbjct: 57 -FFYRPNL 63
>At1g10760.1 68414.m01231 starch excess protein (SEX1) identical to
SEX1 [Arabidopsis thaliana] GI:12044358; supporting cDNA
gi|12044357|gb|AF312027.1|AF312027
Length = 1399
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 97 TTDLNGSDSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELNMSV 243
T+DL G+ S +G Y SW G P+ V L E ++SE+ N +V
Sbjct: 1089 TSDLVGAKSRNIG-YLKGKVPSWVGIPTSVALPFGVFEKVISEKANQAV 1136
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 152 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 15
+VY P P S P V + P Y + P P Y PN+++K
Sbjct: 308 YVYSSPPPPYYS-PSPKVYYKSPPPPYVYSSPPPPYYSPSPNVYYK 352
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 152 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 15
+VY P P S P VV + P Y + P P Y P +++K
Sbjct: 567 YVYSSPPPPYYS-PSPKVVYKSPPPPYVYSSPPPPYYSPSPKVYYK 611
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 118 DSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELN 234
D +G G+YG N +V + +SLE I E+LN
Sbjct: 24 DEIGKGAYGRVYIGLDLENGDFVAIKQVSLENIGQEDLN 62
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/77 (28%), Positives = 27/77 (35%)
Frame = -2
Query: 245 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 66
P SS P PK TY P +VY P P P V + P Y +
Sbjct: 710 PPPYVYSSPPPPYYSPSPKPTYKSPPPP---YVYSSPPPPPYYSPSPKVEYKSPPPPYVY 766
Query: 65 DRPVLPQYFKQPNMFFK 15
P P Y P + +K
Sbjct: 767 SSPPPPYYSPSPKVEYK 783
Score = 27.1 bits (57), Expect = 7.5
Identities = 24/77 (31%), Positives = 28/77 (36%)
Frame = -2
Query: 245 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 66
P SS P PK TY P +VY P P S P VV + P Y +
Sbjct: 433 PPPYVYSSPPPPYYSPSPKLTYKSSPPP---YVYSSPPPPYYS-PSPKVVYKSPPPPYVY 488
Query: 65 DRPVLPQYFKQPNMFFK 15
P P Y P +K
Sbjct: 489 SSPPPPYYSPSPKPSYK 505
>At5g45190.1 68418.m05547 cyclin family protein similar to cyclin T1
[Equus caballus] GI:5052355; contains Pfam profile
PF00134: Cyclin, N-terminal domain
Length = 579
Score = 27.5 bits (58), Expect = 5.7
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -2
Query: 515 HKPFTVTIDIKSDVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQ 336
H+ F K+D T A V MFL K +E P L+D YE+ + K +PG SQ
Sbjct: 89 HRFFFRQSHAKNDRRTIATVCMFLAGKVEET--PRPLKDVIFVSYEI---INKKDPGASQ 143
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = -2
Query: 245 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 66
P ++NS P P Y P +VY P P PF V + P Y +
Sbjct: 342 PPYVYNSPPPPPYYSPSPTVNYKSPPPP---YVYNSPPPPPYYSPFPKVEYKSPPPPYIY 398
Query: 65 DRPVLPQYFK-QPNMFFK 15
+ P P Y+ P + +K
Sbjct: 399 NSPPPPPYYSPSPKITYK 416
>At5g54350.1 68418.m06768 expressed protein ; expression supported
by MPSS
Length = 279
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 91 SGTTDLNGSDSLGVGSYG*TNTNSWKG-NPSY 183
S T D+N +LG S+ TN +SW +PS+
Sbjct: 114 SSTNDINLDLTLGPSSWSNTNPSSWSNTDPSF 145
>At3g54590.1 68416.m06040 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 743
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/83 (27%), Positives = 31/83 (37%)
Frame = -2
Query: 263 LDQGKIPTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNK 84
+D P SS P+ PK Y P +VY P P S P V +
Sbjct: 341 VDYKSPPPPYVYSSPPPPTYSPSPKVDYKSPPPP---YVYSSPPPPYYS-PSPKVEYKSP 396
Query: 83 PFGYPFDRPVLPQYFKQPNMFFK 15
P Y + P P Y P +++K
Sbjct: 397 PPPYVYSSPPPPTYSPSPKVYYK 419
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 26.6 bits (56), Expect = 9.9
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = -2
Query: 245 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 66
P SS P+ PK Y P +VY P P S P V + P Y +
Sbjct: 447 PPPYVYSSPPPPTYSPSPKVDYKSPPPP---YVYSSPPPPYYS-PSPKVYYKSPPPPYVY 502
Query: 65 DRPVLPQYFKQPNMFFK 15
P P Y P +++K
Sbjct: 503 SSPPPPYYSPSPKVYYK 519
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -2
Query: 149 VYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 15
VY P P P V + P Y + P P Y P +++K
Sbjct: 541 VYYKSPPPPYYSPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYK 585
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = -2
Query: 245 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 66
P SS P PK Y P V V P P P P VV + P Y +
Sbjct: 663 PPPYVYSSPPPPYYSPSPKVYYKSPPHP-HVCVCP--PPPPCYSPSPKVVYKSPPPPYVY 719
Query: 65 DRPVLPQYFKQPNMFFK 15
P P Y P +++K
Sbjct: 720 SSPPPPHYSPSPKVYYK 736
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 152 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQP 30
+VYP P P S P P P+ YP P P Y P
Sbjct: 408 YVYPSPPPPPPSPPPYVYPPPPPPYVYP--PPPSPPYVYPP 446
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 152 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 15
+VY P P S P V + P Y + P P Y P +++K
Sbjct: 452 YVYSSPPPPYYS-PSPKVYYKSPPPSYVYSSPPPPYYSPSPKVYYK 496
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 152 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 15
+VY P P S P V + P Y + P P Y P +++K
Sbjct: 477 YVYSSPPPPYYS-PSPKVYYKSPPPSYVYSSPPPPYYSPSPKVYYK 521
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,668,768
Number of Sequences: 28952
Number of extensions: 222176
Number of successful extensions: 863
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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