Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32194
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 319 4e-87
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 319 4e-87
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 319 4e-87
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 319 4e-87
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 319 4e-87
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 319 4e-87
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 319 4e-87
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 319 4e-87
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 319 4e-87
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 319 4e-87
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 319 4e-87
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 318 1e-86
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 317 1e-86
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 317 2e-86
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 214 2e-55
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 208 1e-53
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 176 3e-44
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 166 5e-41
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 95 1e-19
EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein. 29 7.3
BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein. 29 7.3
BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26 pro... 29 7.3
BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein. 29 7.3
AY596776-1|AAT02353.1| 127|Homo sapiens HCV p7-transactivated p... 29 7.3
AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26 ... 29 7.3
AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic pre... 29 7.3
AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens ... 29 7.3
AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens ... 29 7.3
AK124507-1|BAC85868.1| 127|Homo sapiens protein ( Homo sapiens ... 29 7.3
AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens ... 29 7.3
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 29 7.3
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 29 9.7
BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein. 29 9.7
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 29 9.7
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 29 9.7
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 29 9.7
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 29 9.7
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 174
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 174
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 319 bits (783), Expect = 4e-87
Identities = 155/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 318 bits (780), Expect = 1e-86
Identities = 154/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 317 bits (779), Expect = 1e-86
Identities = 154/171 (90%), Positives = 163/171 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 317 bits (778), Expect = 2e-86
Identities = 154/171 (90%), Positives = 162/171 (94%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 361
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLR 124
Query: 362 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 175
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 214 bits (522), Expect = 2e-55
Identities = 103/114 (90%), Positives = 108/114 (94%)
Frame = +2
Query: 173 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 352
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 353 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 119
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 208 bits (507), Expect = 1e-53
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 340
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 176 bits (429), Expect = 3e-44
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +2
Query: 245 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 424
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 425 RAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
RAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 90
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 166 bits (403), Expect = 5e-41
Identities = 81/91 (89%), Positives = 86/91 (94%)
Frame = +2
Query: 2 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 181
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 182 RIRELTSVVQKRFNIPEQSVELYAEKVATRG 274
RIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 95.5 bits (227), Expect = 1e-19
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +2
Query: 368 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 514
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 49
>EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein.
Length = 514
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 232 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 104
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 232 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 104
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 295 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 336
>BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26
protein.
Length = 514
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 232 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 104
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein.
Length = 373
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 232 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 104
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 264 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 305
>AY596776-1|AAT02353.1| 127|Homo sapiens HCV p7-transactivated
protein 1 protein.
Length = 127
Score = 29.5 bits (63), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +1
Query: 313 AYRRSRCTSCLLW--CSPFHHGIWCP 384
A RR RC +C LW C WCP
Sbjct: 88 AARRCRCGACALWTPCGSARSAPWCP 113
>AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26
protein.
Length = 514
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 232 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 104
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic
preconditioning upregulated protein 2 protein.
Length = 498
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 232 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 104
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 389 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 430
>AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens
cDNA FLJ45222 fis, clone BRCAN2019953. ).
Length = 177
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 69 GSWPRTATPAWKCGSLPSARRSL-LWPPGHRVCS 167
GSWPR + P + S PS ++L LW R+ S
Sbjct: 83 GSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 116
>AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens
cDNA FLJ45020 fis, clone BRAWH3016123. ).
Length = 206
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 69 GSWPRTATPAWKCGSLPSARRSL-LWPPGHRVCS 167
GSWPR + P + S PS ++L LW R+ S
Sbjct: 112 GSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 145
>AK124507-1|BAC85868.1| 127|Homo sapiens protein ( Homo sapiens
cDNA FLJ42516 fis, clone BRACE2047385. ).
Length = 127
Score = 29.5 bits (63), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +1
Query: 313 AYRRSRCTSCLLW--CSPFHHGIWCP 384
A RR RC +C LW C WCP
Sbjct: 88 AARRCRCGACALWTPCGSARSAPWCP 113
>AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21016 fis, clone CAE05735. ).
Length = 367
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 232 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 104
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 258 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 299
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 232 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 104
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 616 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 657
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 29.1 bits (62), Expect = 9.7
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 68 RELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVEL 247
+E E +E V P+ E+ + + V+G+KG IR++ + ++P + EL
Sbjct: 957 KEKCEAAKEALEALV-PVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVP--APEL 1013
Query: 248 YAEKVATRGLCA 283
++ +A GL A
Sbjct: 1014 QSDIIAITGLAA 1025
>BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein.
Length = 589
Score = 29.1 bits (62), Expect = 9.7
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 68 RELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVEL 247
+E E +E V P+ E+ + + V+G+KG IR++ + ++P + EL
Sbjct: 278 KEKCEAAKEALEALV-PVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVP--APEL 334
Query: 248 YAEKVATRGLCA 283
++ +A GL A
Sbjct: 335 QSDIIAITGLAA 346
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 29.1 bits (62), Expect = 9.7
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 68 RELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVEL 247
+E E +E V P+ E+ + + V+G+KG IR++ + ++P + EL
Sbjct: 587 KEKCEAAKEALEALV-PVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVP--APEL 643
Query: 248 YAEKVATRGLCA 283
++ +A GL A
Sbjct: 644 QSDIIAITGLAA 655
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 29.1 bits (62), Expect = 9.7
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 68 RELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVEL 247
+E E +E V P+ E+ + + V+G+KG IR++ + ++P + EL
Sbjct: 957 KEKCEAAKEALEALV-PVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVP--APEL 1013
Query: 248 YAEKVATRGLCA 283
++ +A GL A
Sbjct: 1014 QSDIIAITGLAA 1025
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 29.1 bits (62), Expect = 9.7
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 68 RELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVEL 247
+E E +E V P+ E+ + + V+G+KG IR++ + ++P + EL
Sbjct: 640 KEKCEAAKEALEALV-PVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVP--APEL 696
Query: 248 YAEKVATRGLCA 283
++ +A GL A
Sbjct: 697 QSDIIAITGLAA 708
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 29.1 bits (62), Expect = 9.7
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 68 RELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVEL 247
+E E +E V P+ E+ + + V+G+KG IR++ + ++P + EL
Sbjct: 957 KEKCEAAKEALEALV-PVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVP--APEL 1013
Query: 248 YAEKVATRGLCA 283
++ +A GL A
Sbjct: 1014 QSDIIAITGLAA 1025
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,039,140
Number of Sequences: 237096
Number of extensions: 1748595
Number of successful extensions: 7836
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 7675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7836
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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