Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32194
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.61 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.61 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   1.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.7  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   7.5  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   10.0 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   10.0 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   10.0 

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = -3

Query: 466  VDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSD 317
            VD   + K     T+ T L +Y N+T     F    +    + TY +T +
Sbjct: 1162 VDEMEVRKTSALTTVLTGLRKYTNYTIQVLAFTRVGDGVPTTVTYCQTEE 1211


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = -3

Query: 466  VDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSD 317
            VD   + K     T+ T L +Y N+T     F    +    + TY +T +
Sbjct: 1158 VDEMEVRKTSALTTVLTGLRKYTNYTIQVLAFTRVGDGVPTTVTYCQTEE 1207


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 133 DLRADGSDPHFH 98
           ++  DGS PHFH
Sbjct: 621 EISQDGSSPHFH 632


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 148  QDTECARRERTQ 183
            QD +C R+ERTQ
Sbjct: 1646 QDHDCIRQERTQ 1657


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 121  PLGDHYYGHQDTECARRERT 180
            PL +H Y   D++ +  ERT
Sbjct: 1329 PLSEHIYSSIDSDYSTLERT 1348


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -1

Query: 201 EVSSRILRPFSPSTLCVLVA 142
           ++   +++ F+PSTL V+++
Sbjct: 198 QIGHHLIQTFAPSTLVVMLS 217


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 164 LGEKGRRIRELTSVVQKRFNIPEQSVELYAE 256
           +GE G   + +  V     N+ +++V+ Y E
Sbjct: 34  VGETGTSQKIIDEVYNGNVNVEDENVQSYVE 64


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 148 GGHNNDLRADGSDPHFHAGVAV 83
           G   N L ++ +DP   AG+ +
Sbjct: 117 GDEENGLTSESTDPGLVAGIVI 138


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 148 GGHNNDLRADGSDPHFHAGVAV 83
           G   N L ++ +DP   AG+ +
Sbjct: 88  GDEENGLTSESTDPGLVAGIVI 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,568
Number of Sequences: 438
Number of extensions: 2930
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)