Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32193
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-7|AAO38638.1| 247|Caenorhabditis elegans Dehydrogenase... 42 2e-04
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 42 2e-04
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 42 2e-04
AF022968-6|AAB69884.1| 388|Caenorhabditis elegans Dehydrogenase... 39 0.002
Z74032-1|CAA98465.3| 342|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 29 2.6
AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear recep... 28 3.4
AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear horm... 28 3.4
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical ... 28 4.6
Z78059-1|CAH04725.2| 348|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 27 8.0
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 27 8.0
>AF003130-7|AAO38638.1| 247|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform b protein.
Length = 247
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 VLSTILNSLHISQVSVFTLFLWFAISVTGSLWFYHNLQVTAAGK-AVLVTGCDNVLGNAL 432
+L ILN + SVF L + F + + G F LQ+ K AV +TGCD+ G L
Sbjct: 4 ILYWILNLTVVE--SVFYLVVAFLLFLIGR-HFIEKLQINNLSKRAVFITGCDSGFGRGL 60
Query: 433 ARRLDDMGYHVFAGFQTKAG 492
A + + G VFAG T+ G
Sbjct: 61 ALKCLEQGMPVFAGCLTEQG 80
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 VLSTILNSLHISQVSVFTLFLWFAISVTGSLWFYHNLQVTAAGK-AVLVTGCDNVLGNAL 432
+L ILN + SVF L + F + + G F LQ+ K AV +TGCD+ G L
Sbjct: 4 ILYWILNLTVVE--SVFYLVVAFLLFLIGR-HFIEKLQINNLSKRAVFITGCDSGFGRGL 60
Query: 433 ARRLDDMGYHVFAGFQTKAG 492
A + + G VFAG T+ G
Sbjct: 61 ALKCLEQGMPVFAGCLTEQG 80
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 VLSTILNSLHISQVSVFTLFLWFAISVTGSLWFYHNLQVTAAGK-AVLVTGCDNVLGNAL 432
+L ILN + SVF L + F + + G F LQ+ K AV +TGCD+ G L
Sbjct: 29 ILYWILNLTVVE--SVFYLVVAFLLFLIGR-HFIEKLQINNLSKRAVFITGCDSGFGRGL 85
Query: 433 ARRLDDMGYHVFAGFQTKAG 492
A + + G VFAG T+ G
Sbjct: 86 ALKCLEQGMPVFAGCLTEQG 105
>AF022968-6|AAB69884.1| 388|Caenorhabditis elegans Dehydrogenases,
short chain protein16 protein.
Length = 388
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 361 NLQVTAAGKAVLVTGCDNVLGNALARRLDDMGYHVFAGFQTKAG 492
N V ++GK V++TGCD+ G LA L D +VFA T+ G
Sbjct: 25 NFYVESSGKYVMITGCDSGFGRLLATSLLDKHVNVFAACFTQQG 68
>Z74032-1|CAA98465.3| 342|Caenorhabditis elegans Hypothetical
protein F35B12.2 protein.
Length = 342
Score = 35.5 bits (78), Expect = 0.023
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 298 SVFTLFLWF-AISVTGSLWFYHNLQVTAAG----KAVLVTGCDNVLGNALARRLDDMGYH 462
++FT L+F A+ V ++ Y + G +A+L+TGCD G LA++ G+
Sbjct: 8 TLFTWVLYFVAVVVVWNIVRYILELIPEGGSLQDRAILITGCDTGFGRELAKKCAKNGFL 67
Query: 463 VFAGFQT 483
VFAG T
Sbjct: 68 VFAGCLT 74
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +1
Query: 268 ILNSLHISQVSVFTLFLWFAISVTGSLWFYHNLQVTAAGKAVLVTGCDNVLGNALARRLD 447
+ S ++ SV LFL + GS+W + +TAAG + +L + L
Sbjct: 215 VFESNDVANCSVAVLFLCLLPTHLGSMWLRPLVTLTAAGLIFMENKSCQILQSPTLTYLG 274
Query: 448 DMGYHVF 468
D+ Y V+
Sbjct: 275 DISYVVY 281
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +1
Query: 268 ILNSLHISQVSVFTLFLWFAISVTGSLWFYHNLQVTAAGKAVLVTGCDNVLGNALARRLD 447
+ S ++ SV LFL + GS+W + +TAAG + +L + L
Sbjct: 215 VFESNDVANCSVAVLFLCLLPTHLGSMWLRPLVTLTAAGLIFMENKSCQILQSPTLTYLG 274
Query: 448 DMGYHVF 468
D+ Y V+
Sbjct: 275 DISYVVY 281
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +1
Query: 172 PSNPSQEVPWDIIDRCALPIVLCHALAV---VLSTILNSLHISQVSVFTLFL---WFAIS 333
PSNP+ ++ W II+ ++P V ++S+ S+H +++SV + A +
Sbjct: 356 PSNPASQITW-IINGRSVPTPTQREFVVENGIVSSSNVSVHSNELSVEAHQINVECMATN 414
Query: 334 VTGSLWFYHNLQVTAAGKAVLVTGCDN 414
GS H +++ A KA ++TG ++
Sbjct: 415 PEGSSAKQHVIKIIAPPKAPIITGLED 441
>AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear receptor
NHR-92 protein.
Length = 362
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 430 VRCLIHCHTQ*QVLLCRQPLPVNYGRTTRIQLRKLQTIK 314
VR +IH V P PVNY T++ L++ + +K
Sbjct: 121 VRRVIHRDNSRSVFAKEAPRPVNYKEATKVLLKEFKLVK 159
>AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 92 protein.
Length = 354
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 430 VRCLIHCHTQ*QVLLCRQPLPVNYGRTTRIQLRKLQTIK 314
VR +IH V P PVNY T++ L++ + +K
Sbjct: 113 VRRVIHRDNSRSVFAKEAPRPVNYKEATKVLLKEFKLVK 151
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 103 RASITAPSMHRRPSARRGSLIKGPSNPS 186
R + T PS+ P +R GS+I GP NPS
Sbjct: 124 RPAGTIPSLGSMPPSRSGSIITGP-NPS 150
>AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical
protein F54E2.5 protein.
Length = 710
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 256 VLSTILNSLHISQVSVFTLFLWFAISVTGSLWFYHNLQVTAAGKAVLVTGCDNVLGNALA 435
VLST++ +L + +V + LW WF L + +V + C N+L N A
Sbjct: 411 VLSTVITTLLTTVFTVLIMLLWGYFKPMKFFWFLAQLTI-----SVFIISCANLLINVPA 465
>Z78059-1|CAH04725.2| 348|Caenorhabditis elegans Hypothetical
protein C34B4.5 protein.
Length = 348
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 247 LAVVLSTILNSLHISQVSVFTLFLWFAISVTGSLWFYHNLQVTA 378
L VLST+ +L + + +FLW + WF L ++A
Sbjct: 46 LLFVLSTVTATLLTASFLIMAVFLWNHLKPMKFFWFLLQLTISA 89
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical
protein C25G4.5 protein.
Length = 1263
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 82 VAGDVTRRASITAPSMHRRPSAR-RGSLIKGPSNPSQEVPWDIIDRCALPIVLCHALAVV 258
V GD R+A++TA R A+ R + ++ + +++P D I+R + C +A
Sbjct: 759 VVGDQERQAAVTAQRKRREKKAKSRKATVEDFVHYFRDIPDDEIER-EITAAKCSKIADE 817
Query: 259 LSTILN 276
ST L+
Sbjct: 818 KSTFLS 823
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 82 VAGDVTRRASITAPSMHRRPSAR-RGSLIKGPSNPSQEVPWDIIDRCALPIVLCHALAVV 258
V GD R+A++TA R A+ R + ++ + +++P D I+R + C +A
Sbjct: 759 VVGDQERQAAVTAQRKRREKKAKSRKATVEDFVHYFRDIPDDEIER-EITAAKCSKIADE 817
Query: 259 LSTILN 276
ST L+
Sbjct: 818 KSTFLS 823
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,433,751
Number of Sequences: 27780
Number of extensions: 265704
Number of successful extensions: 706
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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