Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32191
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   2.8  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   4.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.9  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   8.6  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   8.6  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 418 DKKKVSDYFEQFAKDNPDWSAA 353
           +KK +S++      + PD+SAA
Sbjct: 295 EKKNISEFINVVLNNYPDFSAA 316


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 105 CPAHRDHVQTSEHLSEQC 52
           CP      Q  + LSE+C
Sbjct: 3   CPLRPSEAQEGDQLSEEC 20


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 105 CPAHRDHVQTSEHLSEQC 52
           CP      Q  + LSE+C
Sbjct: 3   CPLRPSEAQEGDQLSEEC 20


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 105 CPAHRDHVQTSEHLSEQC 52
           CP      Q  + LSE+C
Sbjct: 3   CPLRPSEAQEGDQLSEEC 20


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 125 RTIRY*WGEAPFRADGTGARVLPRIHAL 208
           R IRY W E P     +    LP+   L
Sbjct: 11  RDIRYKWNEGPNSVGVSNEVSLPQFKVL 38


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 125 RTIRY*WGEAPFRADGTGARVLPRIHAL 208
           R IRY W E P     +    LP+   L
Sbjct: 193 RDIRYKWNEGPNSVGVSSEVSLPQFKVL 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,371
Number of Sequences: 336
Number of extensions: 2567
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)