Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32191
         (516 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.060
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 33   0.11 
SB_57999| Best HMM Match : DUF512 (HMM E-Value=1.2)                    30   0.98 
SB_6393| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-28)                  28   4.0  
SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)                  28   4.0  
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.0  
SB_3121| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.0  
SB_59660| Best HMM Match : Mlp (HMM E-Value=0.35)                      28   5.3  
SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16)               28   5.3  
SB_7403| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.3  
SB_42351| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.2  
SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)                 27   9.2  
SB_34108| Best HMM Match : DUF714 (HMM E-Value=0.0053)                 27   9.2  
SB_32447| Best HMM Match : PHD (HMM E-Value=0.017)                     27   9.2  

>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1300

 Score = 34.3 bits (75), Expect = 0.060
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -3

Query: 268 HCALISFIKFASPSQWSTSEQC---VYPRQYAGACPVCPERCFAPSVPNGSCNACL 110
           HC     +KF SP+  + S +C    Y    +G C  C   C A  V  G C AC+
Sbjct: 637 HCTECKGVKFLSPTTGACSYECSTGYYGDAASGLCLPCQSGCSACHV-TGQCTACM 691


>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 792

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -3

Query: 235 SPSQWSTSEQCVYPRQY---AGACPVCPERCFAPSVPNGSCNAC 113
           SP+ +++  +C+    Y     AC  CP   + PS  N +C AC
Sbjct: 123 SPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPSAGNATCVAC 166


>SB_57999| Best HMM Match : DUF512 (HMM E-Value=1.2)
          Length = 247

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +1

Query: 70  F*RLDMITVCGAGRGTRYT---NHSVLMGRSTVQGRRDRRPRTASDTRTAPKSTIGTEMR 240
           F + D  +  G GR TR T   NH+ L  RS  +G    RP+   D+R   K   GT ++
Sbjct: 133 FGKNDTSSTQGTGRETRSTEKNNHNALSYRSDGRGNSSVRPKLKEDSR-KHKIAEGTALK 191

Query: 241 I 243
           +
Sbjct: 192 V 192


>SB_6393| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-28)
          Length = 307

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 10  FYLNTVIEIDCCIYALF*KVF*R-LDMITVCGAGRGTRYTNHS 135
           + LN    I+  IYA F   F R L  I VC  G G RY N S
Sbjct: 254 YTLNFSSMINAPIYAFFKSDFRRALKTILVCKGGGGFRYENES 296


>SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)
          Length = 118

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 516 NPKYRKNVTNLFPSATKRDVSS 451
           NPKY  +V  L P+AT R++ S
Sbjct: 72  NPKYHYDVMKLLPTATLREIKS 93


>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 783

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 130 HSVLMGRSTVQGRRDRRPRTASDTRTAPKSTIGTEMRI 243
           +S L G    +G R R P+  S TR   KST  TE  I
Sbjct: 320 YSKLQGEGKSRGERCRNPKARSKTRRMWKSTWITEREI 357


>SB_3121| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 789

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 496 CNKPISECDKTR-CIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNF 341
           C  P++E  K R C+F+E GW      D  K++ + +    D+P  S   + F
Sbjct: 635 CPWPLTESQKKRVCLFREKGW------DDTKIAGFMKFVQVDDPYRSTNQKRF 681


>SB_59660| Best HMM Match : Mlp (HMM E-Value=0.35)
          Length = 684

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 12/56 (21%)
 Frame = +3

Query: 111 RHALHEPFG----TDGAKHRSGQTGQ--------APAYCLGYTHCSEVDHWDGDAN 242
           RH LH   G    T  AKH SG++GQ        AP YC    H    D   G+ +
Sbjct: 517 RHQLHSAIGKHDSTTKAKHGSGESGQNSDDSGECAPPYCQSKIHERRNDEHVGETS 572


>SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16)
          Length = 711

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 12/56 (21%)
 Frame = +3

Query: 111 RHALHEPFG----TDGAKHRSGQTGQ--------APAYCLGYTHCSEVDHWDGDAN 242
           RH LH   G    T  AKH SG++GQ        AP YC    H    D   G+ +
Sbjct: 136 RHQLHSAIGKHDSTTKAKHGSGESGQNSDDSGECAPPYCQSKIHERRNDEHVGETS 191


>SB_7403| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 68

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -3

Query: 244 KFASPSQWSTSEQCVYPRQYAGACPVCPERCFAPSVP 134
           +F S  +    +    P  Y   C    +RC+ PS+P
Sbjct: 15  EFVSECKCPKGDMTANPPAYPSMCDATGDRCYCPSIP 51


>SB_42351| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 249

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 442 GWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNFK 338
           G   N++ DK  +S+  E+  + N DW+AAVQ  K
Sbjct: 123 GRCSNSLQDK--ISNLLEKKYRTNKDWNAAVQKRK 155


>SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 1127

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 217 TSEQCVYPRQYAGACPVCPERCFAPSVPNGSCNAC 113
           TS + +  +     C  C     + S PNGSC AC
Sbjct: 598 TSRRFLNKKTCCWQCSRCHGNSISNSPPNGSCQAC 632


>SB_34108| Best HMM Match : DUF714 (HMM E-Value=0.0053)
          Length = 455

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 145 GRSTVQGRRDRRPRTASDTRTAPKSTIGTEMR 240
           GR+T +GR     RT ++ RT  +    TE R
Sbjct: 287 GRTTTEGRTTNEGRTTNEGRTTTEGRTTTERR 318


>SB_32447| Best HMM Match : PHD (HMM E-Value=0.017)
          Length = 443

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 68  CSDV-WT*SRCAGQGEARVTRTIRY 139
           C D  W   RC+ + E +VT T+RY
Sbjct: 134 CQDTPWKCQRCSQEDEEQVTSTVRY 158


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,485,560
Number of Sequences: 59808
Number of extensions: 352505
Number of successful extensions: 1315
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)