Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32191
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr...    35   0.030
Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical pr...    35   0.030
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    28   3.4  
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    28   3.4  
AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical...    27   6.0  
U00055-2|AAA50721.1|  223|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
           protein T01D3.3b protein.
          Length = 1011

 Score = 35.1 bits (77), Expect = 0.030
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
 Frame = -3

Query: 211 EQCVYPRQYA--GAC-PVCPERCFAPSVP--NGSCNA-CLALPRTP*SCPDVRTPFRTMH 50
           ++CV P ++A   +C  +CPE C  PSVP  +G+C+A C   P    +  DV  P     
Sbjct: 778 QRCVCPDKHAVWSSCGTLCPEYCGQPSVPVCSGTCSAGCHCAPGFVRARNDVTAPCVPRE 837

Query: 49  KCSN 38
            CS+
Sbjct: 838 SCSS 841


>Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical
           protein T01D3.3a protein.
          Length = 802

 Score = 35.1 bits (77), Expect = 0.030
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
 Frame = -3

Query: 211 EQCVYPRQYA--GAC-PVCPERCFAPSVP--NGSCNA-CLALPRTP*SCPDVRTPFRTMH 50
           ++CV P ++A   +C  +CPE C  PSVP  +G+C+A C   P    +  DV  P     
Sbjct: 569 QRCVCPDKHAVWSSCGTLCPEYCGQPSVPVCSGTCSAGCHCAPGFVRARNDVTAPCVPRE 628

Query: 49  KCSN 38
            CS+
Sbjct: 629 SCSS 632


>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 490 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 362
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 490 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 362
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 490 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 362
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 490 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 362
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical
           protein Y17G7B.19 protein.
          Length = 272

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 133 NGSCNACLALPRTP*SCPDVRTPFRTMHKC 44
           N   N C         CPD  TP+RT  KC
Sbjct: 147 NAKSNMCCRDTLVDSLCPDGFTPYRTQQKC 176


>U00055-2|AAA50721.1|  223|Caenorhabditis elegans Hypothetical
           protein R02F2.5 protein.
          Length = 223

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 232 PSQWSTSEQCVYPRQYAGACPVCPERCFAP 143
           PS  +++EQ  YPRQ     P  P   +AP
Sbjct: 29  PSPNASTEQMAYPRQQPQGIPQGPPPAYAP 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,990,950
Number of Sequences: 27780
Number of extensions: 260154
Number of successful extensions: 880
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)