Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32191
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.1
At3g57780.1 68416.m06436 expressed protein 29 1.4
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 1.4
At4g17940.1 68417.m02672 expressed protein 28 3.2
At5g14610.1 68418.m01713 DEAD box RNA helicase, putative similar... 28 4.3
At2g26450.1 68415.m03173 pectinesterase family protein contains ... 28 4.3
At2g05564.1 68415.m00590 hypothetical protein 28 4.3
At1g24120.1 68414.m03043 DNAJ heat shock protein, putative simil... 28 4.3
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 27 5.7
At1g70100.3 68414.m08067 expressed protein 27 5.7
At1g70100.2 68414.m08066 expressed protein 27 5.7
At1g70100.1 68414.m08065 expressed protein 27 5.7
At1g54890.1 68414.m06267 late embryogenesis abundant protein-rel... 27 5.7
At1g19490.1 68414.m02428 bZIP transcription factor family protei... 27 5.7
At1g14900.1 68414.m01781 high-mobility-group protein / HMG-I/Y p... 27 5.7
At4g39970.1 68417.m05661 haloacid dehalogenase-like hydrolase fa... 27 7.5
At3g59790.1 68416.m06672 mitogen-activated protein kinase, putat... 27 7.5
At2g21830.1 68415.m02594 DC1 domain-containing protein contains ... 27 7.5
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -3
Query: 184 AGACPVCPERCFAPSVPNGSCNACLALPRTP*SCPDVRTPFRTMHKCS 41
AG C ++C AP A L P P CPD+R F CS
Sbjct: 743 AGMRVTCRQKCGAPRTDCRHTCAALCHPSAP--CPDLRCEFSVTITCS 788
>At3g57780.1 68416.m06436 expressed protein
Length = 670
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 118 RYTNHSVLMGRSTVQGRRDRRPRTASDTR 204
R TN+SV RST G+RD++P+ + +
Sbjct: 4 RTTNNSVQSNRSTKNGKRDQKPQKTNGAK 32
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -3
Query: 292 NCPAYDIIHCALISFIKFASPS--QWSTSEQCVYPRQY-AGACPVCPERCFAPSVPNGSC 122
N + + +H A +F PS Q S E Y Y +G P+C A V NG+
Sbjct: 288 NMKSLEELHVANNAFTGVIPPSICQLSNLENFTYSSNYFSGRPPICAASLLADIVVNGTM 347
Query: 121 NACLALPR 98
N L R
Sbjct: 348 NCITGLAR 355
>At4g17940.1 68417.m02672 expressed protein
Length = 274
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 418 DKKKVSDYFEQFAKDNPDWSAAVQNF 341
DK K+ DY+ + + NP+ S + N+
Sbjct: 146 DKSKIGDYYREMLRSNPNNSLLLMNY 171
>At5g14610.1 68418.m01713 DEAD box RNA helicase, putative similar to
RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF00397:
WW domain
Length = 713
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 129 PFGTDGAKHRSGQTGQAPAYCLGYTHCSEVDHWDGDANLIKLI 257
P G + HR G+TG+A A L YT + D ++LIK++
Sbjct: 551 PNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHA-SDLIKIL 592
>At2g26450.1 68415.m03173 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase,PF04043 plant
invertase/pectin methylesterase inhibitor
Length = 614
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 451 KESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNFKTTCL 326
KE A N I+ +V+ FE+ D W +AV +++ TCL
Sbjct: 186 KEETVASLNKINVTEVNS-FEKVVPDLESWLSAVMSYQETCL 226
>At2g05564.1 68415.m00590 hypothetical protein
Length = 231
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -3
Query: 283 AYDIIHCALISFIKFASPSQWSTSEQCVYPRQYAGACPVCPERCFAPS-VPNGSCNAC 113
A DI L K+ + +++ + +YP + P C E C+ S + N CN C
Sbjct: 161 ARDICEEVLEDIKKYGNTLKYTYANSFLYPECGDVSTPECAEMCYMRSRLFNNLCNQC 218
>At1g24120.1 68414.m03043 DNAJ heat shock protein, putative similar
to Altered Response to Gravity [Arabidopsis thaliana]
GI:4249662; contains Pfam profile PF00226 DnaJ domain
Length = 436
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 505 SEKCNKPISECDKTRCIFKESGWAKNNV-IDKKK 407
S + NK S CDK+ + K+S W ++ +DKKK
Sbjct: 401 SRQKNKKPSTCDKSETLKKKSKWFNLHLKLDKKK 434
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -3
Query: 283 AYDIIHCALISFIKFASPSQWSTSEQCVYPRQYAGACPVCPERCFAPS-VPNGSCNAC 113
A DI L K+ + +++ + YP+ + P C E C+ S + N CN C
Sbjct: 1043 ARDICEEVLEDIKKYGNTLKYTYANSFSYPKCGDVSTPECTEMCYMRSRLFNNLCNQC 1100
>At1g70100.3 68414.m08067 expressed protein
Length = 504
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/70 (27%), Positives = 26/70 (37%)
Frame = -3
Query: 502 EKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNFKTTCLS 323
EK + PI + DK K+N + KK V+ K P ++ S
Sbjct: 230 EKDHNPIKKTDKNVRTNHMRASPKSNQVTKKPVTSKVVSGRKTQPSKEKSMTKATNKAAS 289
Query: 322 DSLKPQGVDT 293
LKP G T
Sbjct: 290 PVLKPPGFST 299
>At1g70100.2 68414.m08066 expressed protein
Length = 482
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/70 (27%), Positives = 26/70 (37%)
Frame = -3
Query: 502 EKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNFKTTCLS 323
EK + PI + DK K+N + KK V+ K P ++ S
Sbjct: 230 EKDHNPIKKTDKNVRTNHMRASPKSNQVTKKPVTSKVVSGRKTQPSKEKSMTKATNKAAS 289
Query: 322 DSLKPQGVDT 293
LKP G T
Sbjct: 290 PVLKPPGFST 299
>At1g70100.1 68414.m08065 expressed protein
Length = 467
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/70 (27%), Positives = 26/70 (37%)
Frame = -3
Query: 502 EKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNFKTTCLS 323
EK + PI + DK K+N + KK V+ K P ++ S
Sbjct: 230 EKDHNPIKKTDKNVRTNHMRASPKSNQVTKKPVTSKVVSGRKTQPSKEKSMTKATNKAAS 289
Query: 322 DSLKPQGVDT 293
LKP G T
Sbjct: 290 PVLKPPGFST 299
>At1g54890.1 68414.m06267 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein (EMB7) GI:1350543 from
[Picea glauca]
Length = 347
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 166 CPERCFAPSVPNGSCNACL 110
CP++C + S PNGS AC+
Sbjct: 49 CPKQCPSFSPPNGSTKACV 67
>At1g19490.1 68414.m02428 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 471
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -1
Query: 186 TRAPVPSALNGASPHQY---RMVRVTRASPCPAHRDHVQTSE 70
T+APV S +NG +P ++R +R++ C R ++ +E
Sbjct: 115 TKAPVKSEINGETPKPILASTLIRCSRSNGCGRSRQNLSEAE 156
>At1g14900.1 68414.m01781 high-mobility-group protein / HMG-I/Y
protein nearly identical to high-mobility-group protein
HMG-I/Y protein [Arabidopsis thaliana] GI:1429211;
contains Pfam profiles PF00538: linker histone H1 and H5
family, PF02178: AT hook motif
Length = 204
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 136 VLMGRSTVQGRRDRRPRTASDTRTAPK 216
V+ G +GR +RPRT S+T AP+
Sbjct: 150 VITGSGRPRGRPPKRPRTDSETVAAPE 176
>At4g39970.1 68417.m05661 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|P95649 CbbY protein
{Rhodobacter sphaeroides}
Length = 316
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 469 KTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN-PDWSAAVQNFKTTCLSDSLKPQ 305
K R FKE+GW + + D +D D DW + +K S S++P+
Sbjct: 124 KMRWYFKENGWPTSTIFDSPPQNDDDRAKLIDTLQDWK--TERYKEIIKSGSVEPR 177
>At3g59790.1 68416.m06672 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK10) mitogen-activated protein
kinase (MAPK)(AtMPK10), PMID:12119167
Length = 393
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/120 (17%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = -3
Query: 481 SECDKTRCIFKES-GWAKNNVIDKKKVSDYFE--QFAKDNPDWSAAVQNFKTTCLSDSLK 311
++CD C F + ++N++ + V+ ++ + + D++AA+ + C+ +
Sbjct: 196 TQCDLKICDFGLARATPESNLMTEYVVTRWYRAPELLLGSSDYTAAIDVWSVGCIFMEIM 255
Query: 310 PQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVYPRQYAGACPVCPERCFAPSVPN 131
+ + P D ++ + +PS+ Y ++Y P P + F PN
Sbjct: 256 NR--EPLFPGKDQVNQLRLLLELIGTPSEEELGSLSEYAKRYIRQLPTLPRQSFTEKFPN 313
>At2g21830.1 68415.m02594 DC1 domain-containing protein contains
Pfam profilePF03107: DC1 domain
Length = 569
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 208 QCVYPRQYAGACPVCPERCFAPSVPNGSCNAC 113
Q ++PR Y C +C ER +V SC C
Sbjct: 521 QVMFPRSYQKVCIICHERVLGKAV---SCMEC 549
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,122,251
Number of Sequences: 28952
Number of extensions: 231655
Number of successful extensions: 648
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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