Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32189
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 1e-59
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 224 4e-59
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 9e-59
SB_56| Best HMM Match : Actin (HMM E-Value=0) 223 9e-59
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 222 1e-58
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 221 4e-58
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 197 5e-51
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 74 6e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 5e-12
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_54| Best HMM Match : Actin (HMM E-Value=0) 48 3e-06
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.004
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.32
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.0
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 3.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 4.0
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 5.3
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 6.9
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4) 27 9.2
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 27 9.2
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 226 bits (552), Expect = 1e-59
Identities = 104/111 (93%), Positives = 108/111 (97%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SFLGMES GIHET YNSIMKCDVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST
Sbjct: 239 SFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPST 298
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 299 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 224 bits (547), Expect = 4e-59
Identities = 103/111 (92%), Positives = 107/111 (96%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T
Sbjct: 228 SFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPT 287
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 288 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 223 bits (544), Expect = 9e-59
Identities = 102/111 (91%), Positives = 107/111 (96%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T
Sbjct: 266 SFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPT 325
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 223 bits (544), Expect = 9e-59
Identities = 102/111 (91%), Positives = 107/111 (96%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T
Sbjct: 265 SFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPT 324
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 325 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 222 bits (543), Expect = 1e-58
Identities = 102/111 (91%), Positives = 107/111 (96%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T
Sbjct: 266 SFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPT 325
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 221 bits (539), Expect = 4e-58
Identities = 101/111 (90%), Positives = 107/111 (96%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T
Sbjct: 265 SFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPT 324
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 325 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 197 bits (480), Expect = 5e-51
Identities = 88/111 (79%), Positives = 101/111 (90%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
+FLGME+ GIHE +YN IMKCDVDIRKDLY+N V+SGG+TM+PGIADRMQKEI LA ++
Sbjct: 39 AFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANAS 98
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+K+K+IAPPERKYSVWIGGSILASLSTFQQMWI+KEEY E GP IVHRKCF
Sbjct: 99 MKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 74.1 bits (174), Expect = 6e-14
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Frame = +3
Query: 30 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIT--------------- 164
+ E V N I C +D+R+ LY N V+SGG+TM+ R+Q++I
Sbjct: 223 LSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSG 282
Query: 165 -ALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+ P I+ ++I+ ++Y+VW GGS+LAS F + +K +YDE GP I F
Sbjct: 283 GRIKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 5e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +3
Query: 12 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 191
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 192 KII---APPERKYSVWIGGSILASL 257
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 61.7 bits (143), Expect = 3e-10
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 29/129 (22%)
Frame = +3
Query: 9 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL------ 170
+ +E G+ E ++N+I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 271 INVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVL 330
Query: 171 ---------------APSTI-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWI 281
P T K KI I P RK+ V++GG++LA + W+
Sbjct: 331 KGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWM 390
Query: 282 SKEEYDESG 308
+++EY+E G
Sbjct: 391 TRKEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 54.0 bits (124), Expect = 7e-08
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = +3
Query: 18 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 182
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 183 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 302
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 113
S LG + GIHE+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2310 SLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +3
Query: 30 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 134
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.32
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 26 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 205
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 206 PREEVLRMDRWIHPG 250
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 2 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 175
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 176 LDHQ 187
H+
Sbjct: 954 RKHE 957
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 244 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 107
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +2
Query: 29 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 202
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 203 SPREEVLRMDRWIHP 247
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 96 NTVMSGGTTMYPGIADRMQKEITALAP 176
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +2
Query: 26 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 193
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 194 DHRSPREEVLRMDRWIH 244
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 4.0
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +2
Query: 23 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 196
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 197 -HRSPREEVLRMDRWIHPGFPVHLPADVD 280
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/70 (28%), Positives = 25/70 (35%)
Frame = +2
Query: 23 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 202
V H R V H + H V + V +RRQDA+ + QD DH
Sbjct: 634 VDHHRQDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHRQDVVHPRQDADHH 693
Query: 203 SPREEVLRMD 232
E R D
Sbjct: 694 RQDAEHHRQD 703
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 32 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 202
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 93 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 212
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +2
Query: 26 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 205
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 206 PREEVLRMDRWIH 244
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/73 (26%), Positives = 26/73 (35%)
Frame = +2
Query: 26 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 205
+H R R + RH + RH H R+ R E R+ H+ H
Sbjct: 73 QHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQHERS-RHKTSRHEK 131
Query: 206 PREEVLRMDRWIH 244
R E R +R H
Sbjct: 132 SRHETSRHERSRH 144
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +2
Query: 53 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 226
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 227 MDRWIHP 247
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +2
Query: 23 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 202
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 203 SPREE 217
R+E
Sbjct: 606 DQRDE 610
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 56 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 154
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 93 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 212
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +2
Query: 14 YGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDH 163
Y +++PR R HH +H + H H +HH + Q H
Sbjct: 247 YHKLKNPRHRYHHHHHHHHQH--NHHQHHHHHHHHHHNHHHHHQQHHHHH 294
>SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)
Length = 126
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 137 RRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFP 256
RRQ HR R D +D+D R L DR+ + +P
Sbjct: 4 RRQGTATIHRYRQSDLRDRDRRRVLPRFLEQDRFDNSDYP 43
>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
Length = 352
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 431 SGITRYNVLTVAFRTRTSTTPHSTGVT 351
+GIT N++T A T TSTT + VT
Sbjct: 294 NGITNTNIITTATTTTTSTTISTITVT 320
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,800,168
Number of Sequences: 59808
Number of extensions: 312227
Number of successful extensions: 1123
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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