Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32189
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 212 1e-55
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 212 1e-55
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 210 3e-55
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 210 3e-55
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 210 4e-55
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 209 7e-55
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 204 3e-53
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 204 3e-53
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 194 3e-50
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 182 1e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 168 2e-42
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 160 4e-40
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 113 9e-26
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 90 9e-19
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 81 6e-16
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 76 1e-14
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 59 2e-09
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 52 2e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 7e-06
At5g43500.2 68418.m05318 expressed protein 46 2e-05
At5g43500.1 68418.m05319 expressed protein 46 2e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.049
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 1.4
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 5.7
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 5.7
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 5.7
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 7.5
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 7.5
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 9.9
At3g50690.1 68416.m05546 leucine-rich repeat family protein 27 9.9
At3g04160.1 68416.m00440 expressed protein ; expression supporte... 27 9.9
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 212 bits (517), Expect = 1e-55
Identities = 95/111 (85%), Positives = 104/111 (93%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS+
Sbjct: 267 SFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 212 bits (517), Expect = 1e-55
Identities = 95/111 (85%), Positives = 104/111 (93%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS+
Sbjct: 267 SFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 210 bits (514), Expect = 3e-55
Identities = 94/111 (84%), Positives = 103/111 (92%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS+
Sbjct: 267 SMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 210 bits (514), Expect = 3e-55
Identities = 94/111 (84%), Positives = 103/111 (92%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS+
Sbjct: 267 SMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 210 bits (513), Expect = 4e-55
Identities = 94/111 (84%), Positives = 103/111 (92%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS+
Sbjct: 267 SLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 209 bits (511), Expect = 7e-55
Identities = 94/111 (84%), Positives = 103/111 (92%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS+
Sbjct: 267 SLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 204 bits (498), Expect = 3e-53
Identities = 92/111 (82%), Positives = 101/111 (90%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS+
Sbjct: 267 SMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 204 bits (498), Expect = 3e-53
Identities = 92/111 (82%), Positives = 101/111 (90%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS+
Sbjct: 267 SMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 194 bits (473), Expect = 3e-50
Identities = 86/111 (77%), Positives = 97/111 (87%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP +
Sbjct: 268 SLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPS 327
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 328 MKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 182 bits (443), Expect = 1e-46
Identities = 81/111 (72%), Positives = 95/111 (85%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +GME+ GIHE YNSIMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI ALA +
Sbjct: 219 SLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAAN 278
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
++IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 279 MRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 168 bits (408), Expect = 2e-42
Identities = 77/95 (81%), Positives = 87/95 (91%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
SF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS+
Sbjct: 267 SFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSS 326
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 287
+KIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 327 MKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 160 bits (389), Expect = 4e-40
Identities = 70/110 (63%), Positives = 87/110 (79%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S +G ES GIHE NSI+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS+
Sbjct: 256 SVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSS 315
Query: 183 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 332
+K+K++ PPE + SVWIGGSILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 316 MKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 113 bits (271), Expect = 9e-26
Identities = 49/105 (46%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Frame = +3
Query: 27 GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 206
G+ V SI KCDVDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A
Sbjct: 336 GLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLAS 395
Query: 207 ---PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 332
ER++SVWIGGSILASL +FQQMW SK EY+E G + RKC
Sbjct: 396 GNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 89.8 bits (213), Expect = 9e-19
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 182
S LG+E GI E + I + + L NTV+ GGTT G R QKE L S
Sbjct: 248 SILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSA 306
Query: 183 IKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
I+ ++ PPE YS W+GG+ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 307 IRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 80.6 bits (190), Expect = 6e-16
Identities = 36/109 (33%), Positives = 61/109 (55%)
Frame = +3
Query: 9 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 188
LGM G+ E + +I C ++ LY + +++GG+T++P + +R++ E+ L P
Sbjct: 312 LGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFD 371
Query: 189 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 335
+KI + VW GGS+LAS F+ M ++K EY+E G R+ F
Sbjct: 372 VKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 76.2 bits (179), Expect = 1e-14
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 12/112 (10%)
Frame = +3
Query: 9 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TAL 170
+ +E G+ + V+ I + D+D R LY + V+SGG+TMYPG+ R++KEI T L
Sbjct: 268 IDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVL 327
Query: 171 APS-----TIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 308
+ ++++I PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 328 KGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Frame = +3
Query: 54 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI---------------- 185
I +D R+ LY N V+SGG+TM+ R+Q+++ + + +
Sbjct: 313 IQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPV 372
Query: 186 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 317
++ +++ P ++++VW GGS+L+S F +KEEY+E G I
Sbjct: 373 EVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Frame = +3
Query: 12 GMESCGIHETVYNSIMKCDV-DIRKD--LYANTVMSGGTTMYPGIADRMQKEITALAPST 182
GM + +H+ V + CD + D + V++GG+ PG+++R+++E+ PS+
Sbjct: 363 GMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSS 422
Query: 183 IK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEY 296
I I++I PP + W G ++++LS F W I+++++
Sbjct: 423 ISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 47.2 bits (107), Expect = 7e-06
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +3
Query: 3 SFLGMESCGIHETVYNSIMKCDVD---IRKDLYANTVMSGGTTMYPGIADRMQKEITALA 173
+ +G++ G+ E SI + D + + L ++ +M+GG ++ PG+ +R++ I +
Sbjct: 606 NLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLECGIRMIR 665
Query: 174 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 308
P I ++ + W G S A+ F +K +YDE G
Sbjct: 666 PCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 18 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 194
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 195 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 308
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 18 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 194
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 195 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 308
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.049
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 30 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 209
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 210 ERKYS 224
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +3
Query: 30 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 209
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 210 ERKYS 224
ERK++
Sbjct: 394 ERKHA 398
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 26 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 199
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 26 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 199
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 146 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 259
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 102 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 200
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 102 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 200
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 156 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 302
EI+ L P + +KI+A K V I S+L+ F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTK--VAISTSVLSKQWRFLWMWLPKLKYDD 48
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 140 RQDAEGDHRPRALDHQDQDHRSPREE 217
+ DAEG+ RP + D D++ EE
Sbjct: 153 KTDAEGNERPESDDEDDEEDEEDEEE 178
>At3g04160.1 68416.m00440 expressed protein ; expression supported
by MPSS
Length = 712
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 35 RDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPRE 214
RDR + H RR ++H + R R+ + D++ + D D+ + PR
Sbjct: 639 RDRRKDKHNDRRDDEFTRTKRHSIEGESYQNYRSSREKSSSDYKTKRDDPYDRRSQQPRN 698
Query: 215 EVLRMDRWI 241
+ L DR+I
Sbjct: 699 QNLFEDRYI 707
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,125,630
Number of Sequences: 28952
Number of extensions: 201550
Number of successful extensions: 666
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -