Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32181
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 9e-23
SB_56| Best HMM Match : Actin (HMM E-Value=0) 103 9e-23
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 103 9e-23
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 3e-22
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 96 2e-20
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 44 7e-05
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 29 1.7
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.0
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 27 6.9
SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4) 27 9.2
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 105 bits (251), Expect = 3e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 264 GGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 323
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 324 EYDESGPAIVHRKCF 338
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 104 bits (249), Expect = 5e-23
Identities = 51/75 (68%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPG+ADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 275 GGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 334
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 335 EYDESGPAIVHRKCF 349
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 103 bits (247), Expect = 9e-23
Identities = 51/75 (68%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GG+ MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 103 bits (247), Expect = 9e-23
Identities = 51/75 (68%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GG+ MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 301 GGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 361 EYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 103 bits (247), Expect = 9e-23
Identities = 51/75 (68%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GG+ MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 101 bits (243), Expect = 3e-22
Identities = 50/75 (66%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GG+ M+PGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 301 GGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 361 EYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 95.9 bits (228), Expect = 2e-20
Identities = 48/75 (64%), Positives = 51/75 (68%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GG+ M+PGIADRMQKE PERKYSVWIGGSILASLS FQQMW +KE
Sbjct: 75 GGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKE 134
Query: 335 EYDESGPGIVXRKXF 291
EY E GP IV RK F
Sbjct: 135 EYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2
Query: 413 RKYSVWIGGSILASLSXFQQMWXSKEEYDESGPGIVXRKXF 291
++Y+VW GGS+LAS F + +K +YDE GP I F
Sbjct: 300 QRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 31.1 bits (67), Expect = 0.56
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -2
Query: 413 RKYSVWIGGSILAS-LSXFQQMWXSKEEYDESG 318
RK+ V++GG++LA + W +++EY+E G
Sbjct: 367 RKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXP---ERKYSVWIGGSILASL 369
GG + G +R+ +E E++++ WIGGSILASL
Sbjct: 179 GGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 492 YRRQDAEGDHRPRALDHQDQDHRSPREE 409
+RRQDA DHR + DH QD PR++
Sbjct: 664 HRRQDA--DHRRQDADHHRQDVVHPRQD 689
>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
Length = 352
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 195 SGITRXNVLTVAFXTRTSTTPHSTGVT 275
+GIT N++T A T TSTT + VT
Sbjct: 294 NGITNTNIITTATTTTTSTTISTITVT 320
>SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)
Length = 126
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 489 RRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFP 370
RRQ HR R D +D+D R L DR+ + +P
Sbjct: 4 RRQGTATIHRYRQSDLRDRDRRRVLPRFLEQDRFDNSDYP 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,055,766
Number of Sequences: 59808
Number of extensions: 173232
Number of successful extensions: 332
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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