Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32181
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 105 2e-23
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 105 2e-23
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 105 2e-23
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 105 2e-23
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 105 2e-23
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 105 2e-23
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 105 2e-23
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 103 8e-23
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 101 4e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 66 2e-11
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 58 5e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 44 6e-05
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 2.6
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 8.0
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 8.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 258 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 317
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 318 EYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 288 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 347
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 348 EYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 105 bits (251), Expect = 2e-23
Identities = 52/75 (69%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 103 bits (247), Expect = 8e-23
Identities = 51/75 (68%), Positives = 53/75 (70%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT M+PGIADRMQKE PERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 301 GGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 361 EYDESGPSIVHRKCF 375
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 101 bits (241), Expect = 4e-22
Identities = 51/75 (68%), Positives = 52/75 (69%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT MYPGIADRMQKE ERKYSVWIGGSILASLS FQQMW SK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPTMKIKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 335 EYDESGPGIVXRKXF 291
EYDESGP IV RK F
Sbjct: 361 EYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/40 (72%), Positives = 30/40 (75%)
Frame = -2
Query: 416 ERKYSVWIGGSILASLSXFQQMWXSKEEYDESGPGIVXRK 297
ERKY WIGGSIL SL FQQMW SK EYDESG IV +K
Sbjct: 395 ERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKK 434
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GGT ++ G DR+ E ER WIGGSI+ASL F++MW K+
Sbjct: 300 GGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKK 359
Query: 335 EYDESGPGIVXRKXF 291
EY++ G + ++ F
Sbjct: 360 EYEDMGASAMHKRFF 374
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -2
Query: 413 RKYSVWIGGSILASLSXFQQMWXSKEEYDESGPGI 309
++Y+VW GGS+LAS S F Q+ +K EY E GP I
Sbjct: 380 QRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPE-----------RKYSVWIGGSILASL 369
GGT MYPG+ R++KE + RK+ V++GG++LA+L
Sbjct: 305 GGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANL 364
Query: 368 --SXFQQMWXSKEEYDESG 318
Q W SK+EY+E G
Sbjct: 365 MKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -2
Query: 515 GGTXMYPGIADRMQKEXXXXXXXXXXXXXXXXPERKYSVWIGGSILASLSXFQQMWXSKE 336
GG + PGIA+++++E P R + ++G I+AS S F+ S +
Sbjct: 479 GGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQ 538
Query: 335 E 333
+
Sbjct: 539 Q 539
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 498 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 400
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 456 RALDHQDQDHRSPREEVLRMDRW 388
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 456 RALDHQDQDHRSPREEVLRMDRW 388
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,989,213
Number of Sequences: 27780
Number of extensions: 119961
Number of successful extensions: 293
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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