Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32165
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z81521-5|CAE17802.1| 657|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z70270-10|CAA94231.1| 726|Caenorhabditis elegans Hypothetical p... 29 1.5
Z68215-17|CAA92458.1| 726|Caenorhabditis elegans Hypothetical p... 29 1.5
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 2.6
U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81136-4|CAI46577.1| 738|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 31.9 bits (69), Expect = 0.28
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 387 PSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P + P++ P + PS+ P + SP++ P I P L PYI
Sbjct: 376 PVIFSPNIFSPLILNPSVLSPWIFSPAVPLPFILSPYLLSPYI 418
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P++ P + PS+ P + P++ P + SP + P I+ P + P+I
Sbjct: 381 PNIFSPLILNPSVLSPWIFSPAVPLPFILSPYLLSPYIFSPLVMAPFI 428
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P + P ++G S+ P + P++ P + +PS+ P I+ P + P+I
Sbjct: 362 PYMFSP-VYGLSVLGPVIFSPNIFSPLILNPSVLSPWIFSPAVPLPFI 408
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCP 509
P L P + P + P + P + PN+ +P + P + P CP
Sbjct: 411 PYLLSPYIFSPLVMAPFILNPYVLSPNIFNPYVLSPLVLSPLFLCP 456
>Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical
protein F19H8.4 protein.
Length = 749
Score = 31.9 bits (69), Expect = 0.28
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 387 PSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P++ P L P + PS+ P + SP++ P I P L PY+
Sbjct: 630 PTVLSPGLFTPLILNPSVLSPYVFSPTVGIPFILSPYLLSPYV 672
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 399 GPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
GP++ P L P + P++ SP + P++ P + PY+
Sbjct: 629 GPTVLSPGLFTPLILNPSVLSPYVFSPTVGIPFILSPYL 667
Score = 31.1 bits (67), Expect = 0.49
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P L P + PS+ P + P++ P + SP + P ++ P + P+I
Sbjct: 635 PGLFTPLILNPSVLSPYVFSPTVGIPFILSPYLLSPYVFSPLVMAPFI 682
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P L P ++G ++ P++ P L P + +PS+ P ++ P + P+I
Sbjct: 616 PILFTP-IYGLNVLGPTVLSPGLFTPLILNPSVLSPYVFSPTVGIPFI 662
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCP 509
P L P + P + P + P + PN+ +P + P I P + CP
Sbjct: 665 PYLLSPYVFSPLVMAPFILNPYVLSPNVFNPYVLSPLILSPLVICP 710
>Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical
protein B0285.3 protein.
Length = 166
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 108 GGDRSTVG*RSVSKAGFARGKRHSGEGNKN 19
GG+++ G R + GF RG+ G GNKN
Sbjct: 84 GGNQNNYGNRGRGRGGFDRGRGGGGGGNKN 113
>Z81521-5|CAE17802.1| 657|Caenorhabditis elegans Hypothetical
protein F32A11.7 protein.
Length = 657
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P L P + P L P P L P + SP P I CPG P++
Sbjct: 523 PWLLVPVILSPRLLSPVAVNPFLLVPIILSPLAFNPFILCPGSMNPFV 570
>Z70270-10|CAA94231.1| 726|Caenorhabditis elegans Hypothetical
protein C53B4.8a protein.
Length = 726
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P++++ S+ GP + P L PS+ P L S + P + P + PY+
Sbjct: 597 PTINKLSVLGPLVISPQLFCPSVLSPLLMSLPVISPQVGNPLIFSPYV 644
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 363 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
+++ S+ P + P L CPS+ P L + SP + P I+ P + P +
Sbjct: 599 INKLSVLGPLVISPQLFCPSVLSPLLMSLPVISPQVGNPLIFSPYVLGPNV 649
>Z68215-17|CAA92458.1| 726|Caenorhabditis elegans Hypothetical
protein C53B4.8a protein.
Length = 726
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P++++ S+ GP + P L PS+ P L S + P + P + PY+
Sbjct: 597 PTINKLSVLGPLVISPQLFCPSVLSPLLMSLPVISPQVGNPLIFSPYV 644
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 363 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
+++ S+ P + P L CPS+ P L + SP + P I+ P + P +
Sbjct: 599 INKLSVLGPLVISPQLFCPSVLSPLLMSLPVISPQVGNPLIFSPYVLGPNV 649
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 369 RPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPS 482
+PS PS +GPS + PS + PS + P+ P+ + PS
Sbjct: 1001 KPSPSGPSPNGPSPNGPSPNGPSPNGPSPNGPTPNWPS 1038
>U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical
protein B0310.4 protein.
Length = 112
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 366 HRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHR 476
HR HR H H HR HR R HR
Sbjct: 51 HRGETHRGETHRGKTHRGETHRGETHRGETRRGETHR 87
>Z81136-4|CAI46577.1| 738|Caenorhabditis elegans Hypothetical
protein W02B8.6 protein.
Length = 738
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
P L P + P + P + P + P + SP + P + PG+ P+I
Sbjct: 604 PWLFVPLIASPRILSPVILDPFMFVPIILSPVVLDPVVLSPGVFNPFI 651
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,858,139
Number of Sequences: 27780
Number of extensions: 57227
Number of successful extensions: 226
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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