Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32165
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g75690.1 68414.m08793 chaperone protein dnaJ-related contains...    34   0.065
At1g54970.1 68414.m06278 proline-rich family protein similar to ...    33   0.086
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t...    32   0.20 
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t...    30   1.1  
At4g14910.1 68417.m02291 imidazoleglycerol-phosphate dehydratase...    28   4.3  
At5g66840.1 68418.m08427 SAP domain-containing protein contains ...    27   7.5  
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ...    27   7.5  
At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) / ...    27   7.5  
At3g62680.1 68416.m07041 proline-rich family protein contains pr...    27   9.9  
At1g57770.1 68414.m06554 amine oxidase family contains similarit...    27   9.9  

>At1g75690.1 68414.m08793 chaperone protein dnaJ-related contains
           Pfam PF00684 : DnaJ central domain (4 repeats); similar
           to bundle sheath defective protein 2 (GI:4732091) [Zea
           mays]
          Length = 154

 Score = 33.9 bits (74), Expect = 0.065
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 387 PSLHGPSLHCPSLHRP-SLHRPNLRSPSIHRPSI 485
           P LH P +HCP    P S    NLRSPS   P I
Sbjct: 9   PRLHSPFIHCPINFTPSSFSARNLRSPSTSYPRI 42


>At1g54970.1 68414.m06278 proline-rich family protein similar to
           proline-rich protein GI:170048 from [Glycine max]
          Length = 335

 Score = 33.5 bits (73), Expect = 0.086
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 348 VHCHGLHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCP 509
           V+   +H+P+L  P    P+L  P+   P  ++P L +P ++ P +Y P L  P
Sbjct: 60  VYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKPTLPAP-VYTPPVYKPTLSPP 112



 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCP 494
           P ++ P +H P+L  P   +P+L  P    P  ++P++  P
Sbjct: 58  PPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKPTLPAP 98



 Score = 27.5 bits (58), Expect = 5.7
 Identities = 14/44 (31%), Positives = 28/44 (63%)
 Frame = +3

Query: 363 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCP 494
           L  P   +P+L  P+++ P+L  P  ++P+L SP +++P++  P
Sbjct: 128 LSPPVYTKPTL-SPTVYKPTLSPPVNNKPSL-SPPVYKPTLSPP 169


>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to pEARLI
           1 (Accession No. L43080): an Arabidopsis member of a
           conserved gene family (PGF95-099), Plant Physiol. 109
           (4), 1497 (1995); contains Pfam protease inhibitor/seed
           storage/LTP family domain PF00234
          Length = 182

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 369 RPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCP 509
           RP L  P +  P +  PS+  P +  P++ SPS+  PS+  P +  P
Sbjct: 37  RP-LPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSP 82



 Score = 31.5 bits (68), Expect = 0.35
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 363 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCP 494
           L  P +  P +  PS+  P +  PS+  P++ +PS+  PS+  P
Sbjct: 39  LPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSP 82



 Score = 30.7 bits (66), Expect = 0.61
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPS 482
           P +  PS+  P +  PS+  PS+  P++ SPS+  P+
Sbjct: 47  PKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSPN 83



 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCPYI 515
           PS     L  P +  P +  PS+  P + +PS+  PS+  P +  P +
Sbjct: 32  PSPKPRPLPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSV 79


>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to pEARLI
           1 (Accession No. L43080): an Arabidopsis member of a
           conserved gene family (PGF95-099), Plant Physiol. 109
           (4), 1497 (1995); contains Pfam protease inhibitor/seed
           storage/LTP family domain PF00234
          Length = 177

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPS 482
           P +  P    PS+  PS+  PS+  P++ +PS+  P+
Sbjct: 42  PKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPN 78



 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 387 PSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCP 494
           P +  P    PS+  PS+  P++ +PS+  PS+  P
Sbjct: 42  PKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSP 77



 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 402 PSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCP 509
           P +  P    PS+  P++ +PS+  PS+  P +  P
Sbjct: 42  PKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSP 77


>At4g14910.1 68417.m02291 imidazoleglycerol-phosphate dehydratase,
           putative similar to SP|P34047
           Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19)
           (IGPD 1) {Arabidopsis thaliana}; contains Pfam profile
           PF00475: imidazoleglycerol-phosphate dehydratase
          Length = 272

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +3

Query: 363 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYC 491
           L RP+L   +L  P     S H P      + S S HRPSI C
Sbjct: 11  LLRPNLSSRALLPPRTSIASSHPPPPRFLVMNSQSQHRPSISC 53


>At5g66840.1 68418.m08427 SAP domain-containing protein contains
           Pfam domain PF02037: SAP domain
          Length = 551

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
 Frame = +3

Query: 366 HRPSLHRPSLHGPSLHCPSLHRP-SLHRPNLRSPSIH 473
           H P  H P  + P  H P  + P + H P    P  H
Sbjct: 343 HAPRSHAPPTYAPRPHAPRSYAPINSHLPRPNIPPYH 379


>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
           contains Pfam domain, PF00096: Zinc finger, C2H2 type
          Length = 500

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +3

Query: 360 GLHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCP 509
           GL   S   PSL+  S   PSL  PS     +       PS++ P +R P
Sbjct: 307 GLFVSSTASPSLYASSTASPSLFAPSSSMEPISLCLSTNPSLFGPTIRDP 356


>At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) /
           caspase family protein contains similarity to
           latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
           contains Pfam profile PF00656: ICE-like protease
           (caspase) p20 domain
          Length = 418

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +3

Query: 372 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRP 479
           P  H P    P  H P    P  H P   SP  H P
Sbjct: 70  PYTHAPHAPSPFNHAPPDSYPFTHAPPASSPFNHAP 105


>At3g62680.1 68416.m07041 proline-rich family protein contains
           proline-rich region, INTERPRO:IPR000694
          Length = 313

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +3

Query: 348 VHCHGLHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGLRCP 509
           V+ H    P   +P++  P ++ P +++P+L  P    P+I  P +Y P +  P
Sbjct: 75  VYKHTPSPPVYTKPTIP-PPVYTPPVYKPTLSPPVYTKPTI-PPPVYTPPVYKP 126


>At1g57770.1 68414.m06554 amine oxidase family contains similarity
           to carotenoid isomerase [Lycopersicon esculentum]
           GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
           from (Cercospora nicotianae); contains Pfam profile
           PF01593 amine oxidase, flavin-containing
          Length = 574

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 432 PSLHRPNLRSPSIHRPSIYCPG 497
           PS+  PNL  P  H    YCPG
Sbjct: 423 PSVLSPNLAPPGKHVLHAYCPG 444


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,702,959
Number of Sequences: 28952
Number of extensions: 56457
Number of successful extensions: 278
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)