Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32164
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 1e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 7e-48
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 2e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 185 2e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 185 2e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 7e-47
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 166 1e-41
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 68 4e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 6e-10
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 34 0.080
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.0
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_54| Best HMM Match : Actin (HMM E-Value=0) 27 6.9
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4) 27 9.2
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 27 9.2
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 189 bits (460), Expect = 1e-48
Identities = 86/91 (94%), Positives = 90/91 (98%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 337
CDVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGS
Sbjct: 259 CDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGS 318
Query: 336 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 244
ILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 319 ILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (454), Expect = 7e-48
Identities = 85/91 (93%), Positives = 89/91 (97%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 337
CDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGS
Sbjct: 248 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGS 307
Query: 336 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 244
ILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 308 ILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 185 bits (451), Expect = 2e-47
Identities = 84/91 (92%), Positives = 89/91 (97%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 337
CDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGS
Sbjct: 286 CDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGS 345
Query: 336 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 244
ILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 185 bits (451), Expect = 2e-47
Identities = 84/91 (92%), Positives = 89/91 (97%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 337
CDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGS
Sbjct: 285 CDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGS 344
Query: 336 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 244
ILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 345 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 89/91 (97%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 337
CDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGS
Sbjct: 286 CDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGS 345
Query: 336 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 244
ILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (446), Expect = 7e-47
Identities = 83/91 (91%), Positives = 89/91 (97%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 337
CDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGS
Sbjct: 285 CDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGS 344
Query: 336 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 244
ILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 345 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 166 bits (403), Expect = 1e-41
Identities = 74/91 (81%), Positives = 84/91 (92%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 337
CDVDIRKDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGS
Sbjct: 59 CDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGS 118
Query: 336 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 244
ILASLSTFQQMWI+KEEY E GP IVHRKCF
Sbjct: 119 ILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 68.1 bits (159), Expect = 4e-12
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 16/107 (14%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA----------------LAPSTIKIK 385
C +D+R+ LY N V+SGG+TM+ R+Q++I + P I+ +
Sbjct: 234 CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQ 293
Query: 384 IIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 244
+I+ ++Y+VW GGS+LAS F + +K +YDE GP I F
Sbjct: 294 VISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 60.9 bits (141), Expect = 6e-10
Identities = 25/67 (37%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Frame = -1
Query: 513 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII---APPERKYSVWIG 343
D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++K+I + E++++ WIG
Sbjct: 164 DIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIG 223
Query: 342 GSILASL 322
GSILASL
Sbjct: 224 GSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 50.8 bits (116), Expect = 7e-07
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST-------IK-IKIIAPP-ER 364
C +D RK L N V+ GGT M PG R+ +EI L S IK +K+ PP
Sbjct: 69 CPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNA 128
Query: 363 KYSVWIGGSILASLSTFQQMWISKEEYDE 277
+ W+GG+I SL ++E Y +
Sbjct: 129 NITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 29/110 (26%)
Frame = -1
Query: 513 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL---------------------APST 397
D+D R + Y + V+SGG+TMYPG+ R+++EI L P T
Sbjct: 290 DIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLT 349
Query: 396 I-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 271
K KI I P RK+ V++GG++LA + W++++EY+E G
Sbjct: 350 ADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 33.9 bits (74), Expect = 0.080
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = -1
Query: 513 DVDIRKDLYANTVMSGGTTMYPG 445
D+D+R+ LY+N V+SGG+T++ G
Sbjct: 269 DLDLRRVLYSNIVLSGGSTLFKG 291
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 445 YRRQDAEGDHRPRALDHQDQDHRSPREE 362
+RRQDA DHR + DH QD PR++
Sbjct: 664 HRRQDA--DHRRQDADHHRQDVVHPRQD 689
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 335 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 472
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 483 NTVMSGGTTMYPGIADRMQKEITALAP 403
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 486 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 367
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1
Query: 516 CDVDIRKDLYANTVMSG 466
CD+D+R +L+ N V+SG
Sbjct: 2330 CDIDLRAELFHNIVLSG 2346
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 486 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 367
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
>SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)
Length = 126
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 442 RRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFP 323
RRQ HR R D +D+D R L DR+ + +P
Sbjct: 4 RRQGTATIHRYRQSDLRDRDRRRVLPRFLEQDRFDNSDYP 43
>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
Length = 352
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 148 SGITRYNVLTVAFRTRTSTTPHSTGVT 228
+GIT N++T A T TSTT + VT
Sbjct: 294 NGITNTNIITTATTTTTSTTISTITVT 320
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,256,899
Number of Sequences: 59808
Number of extensions: 286917
Number of successful extensions: 943
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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