Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32157
         (326 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    54   3e-10
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    34   5e-04

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 54.4 bits (125), Expect = 3e-10
 Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = -2

Query: 316 AFAGFSVGKRNCIGKTYALISXKIILXHLVRRYKVTADIXKIEFKM--DXIMTPSDNCYV 143
           AF  FS G R+C+G+ YA++  KI+L  ++R ++V +D+ + EF++  D I+  +D   +
Sbjct: 477 AFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFRVRSDVKESEFRLQADIILKRADGFKI 536

Query: 142 DFELRK 125
             E RK
Sbjct: 537 RLEPRK 542


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 33.9 bits (74), Expect = 5e-04
 Identities = 15/66 (22%), Positives = 35/66 (53%)
 Frame = -2

Query: 325 NPNAFAGFSVGKRNCIGKTYALISXKIILXHLVRRYKVTADIXKIEFKMDXIMTPSDNCY 146
           +P   A F  G+R C GK +  ++ ++IL  ++R +++  +  +++ + + I+ P     
Sbjct: 452 SPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFEIIVE-EELDLQFEFILAPKGPVS 510

Query: 145 VDFELR 128
           + F  R
Sbjct: 511 LGFRDR 516


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,770
Number of Sequences: 438
Number of extensions: 1015
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)