Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32151
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024882-8|AAF60931.2| 340|Caenorhabditis elegans Seven tm rece... 30 0.85
AC006680-6|AAK72300.1| 335|Caenorhabditis elegans Serpentine re... 29 1.5
U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024882-11|AAX22280.1| 333|Caenorhabditis elegans Seven tm rec... 29 2.6
AC024882-10|AAF60929.1| 341|Caenorhabditis elegans Seven tm rec... 29 2.6
Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical pr... 27 6.0
U13019-12|AAC24448.1| 316|Caenorhabditis elegans Serpentine rec... 27 6.0
Z81039-8|CAB02779.2| 225|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z70687-1|CAA94616.3| 403|Caenorhabditis elegans Hypothetical pr... 27 8.0
>AC024882-8|AAF60931.2| 340|Caenorhabditis elegans Seven tm
receptor protein 168 protein.
Length = 340
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 394 RYAVYLVRYSIFLLFKIKNLVLFILTESSNSITEHTYSITYICT*MRVFVALTLYTYGPV 215
++A+ L + L F I L+ ILT+S + + Y + Y C ++ L + GPV
Sbjct: 7 KFAIQLFSFICSLFFNII-LIYLILTKSPKKMGTYKYLLVYFCCFSMLYSILDIIV-GPV 64
Query: 214 PNIHPVCLF 188
+ H F
Sbjct: 65 IHSHGSSFF 73
>AC006680-6|AAK72300.1| 335|Caenorhabditis elegans Serpentine
receptor, class j protein13 protein.
Length = 335
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -2
Query: 311 VQLYYGTYLFHHVHMYIDACFCSFNAVYLWPCSKYPPCVSFLINEHIIWHVVIELSLLAP 132
+ L YG + H ++ YI F F P + FLI+ I+W + EL L A
Sbjct: 102 ISLSYGILVIHFIYRYIALFFPQFVKKVFQPLGMCCILIFFLIH-GIVWGGICELFLYAD 160
Query: 131 E 129
+
Sbjct: 161 D 161
>U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical
protein H03E18.2 protein.
Length = 204
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 290 YLFHHVHMYIDACFCSF-NAVYLWPCSKYPPCVSF 189
Y+ HH+ M I CFC F A++ W + +SF
Sbjct: 108 YIAHHIVMAISYCFCLFLFAMFAWKQHFFVEILSF 142
>AC024882-11|AAX22280.1| 333|Caenorhabditis elegans Seven tm
receptor protein 169,isoform b protein.
Length = 333
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -3
Query: 394 RYAVYLVRYSIFLLFKIKNLVLFILTESSNSITEHTYSITYICT*MRVFVALTLYTYGPV 215
++ + LV + + ++F L+ ILT S + + Y + Y C ++ L + P
Sbjct: 7 KFTIQLVSFIVSIIFNF-TLIYLILTRSPKKMGTYKYLLIYFCCFSILYSILDIIV-EPF 64
Query: 214 PNIHPVCLF 188
H C F
Sbjct: 65 IQSHGSCFF 73
>AC024882-10|AAF60929.1| 341|Caenorhabditis elegans Seven tm
receptor protein 169,isoform a protein.
Length = 341
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -3
Query: 394 RYAVYLVRYSIFLLFKIKNLVLFILTESSNSITEHTYSITYICT*MRVFVALTLYTYGPV 215
++ + LV + + ++F L+ ILT S + + Y + Y C ++ L + P
Sbjct: 7 KFTIQLVSFIVSIIFNF-TLIYLILTRSPKKMGTYKYLLIYFCCFSILYSILDIIV-EPF 64
Query: 214 PNIHPVCLF 188
H C F
Sbjct: 65 IQSHGSCFF 73
>Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical
protein C35D6.10 protein.
Length = 300
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/35 (28%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 421 LLEKSKFF-FRYAVYLVRYSIFLLFKIKNLVLFIL 320
+L ++FF F+Y + + Y +F++ + N+V+F++
Sbjct: 81 ILTNNRFFIFKYLTFSICYFLFIISQTFNIVVFLV 115
>U13019-12|AAC24448.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 8 protein.
Length = 316
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -3
Query: 427 NSLLEKSKFFFRYAVYLVRYSIFLLFKIKNLVLFILTESSNSITEHTYSITY 272
N+++ K F + + + Y + + +L LFI+ + IT T SIT+
Sbjct: 164 NTIISKKVLIFYFGGFYINYLKIIPWASMSLFLFIIRSAVVMITVVTTSITF 215
>Z81039-8|CAB02779.2| 225|Caenorhabditis elegans Hypothetical
protein C25D7.10 protein.
Length = 225
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 412 KSKFFFRYAVYLVRYSIFLLFKIKNLVLFILTESSNSITEHTYSITYIC 266
K K + ++ V IFL++ I N+ LFI T + Y+C
Sbjct: 26 KKKMIYSRKIFAVVSVIFLIYAIGNMTLFI-TPGVREFVQQFKIFLYLC 73
>Z70687-1|CAA94616.3| 403|Caenorhabditis elegans Hypothetical
protein T14C1.1 protein.
Length = 403
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 448 CPRLTFQNSLLEKSKFFFRYAVYLVRYSIFLLFKIKNLVL-FILTESSNSITEHTYSITY 272
CP N + + + + YA++L +F L + L++ F + SS S + T S+
Sbjct: 232 CPATLRYNEMYQSIYYKYMYAIFLAVGPLFTLIILNTLIIGFSVFGSSASNMDDTMSLIL 291
Query: 271 I 269
+
Sbjct: 292 V 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,018,959
Number of Sequences: 27780
Number of extensions: 259848
Number of successful extensions: 694
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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