Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32150
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...   137   5e-35
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...   137   5e-35
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...   126   2e-31
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...   123   8e-31
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.92 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.92 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.92 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.92 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.92 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   0.92 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   4.9  

>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 4   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 64  ESTLHLV 70


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 4   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 64  ESTLHLV 70



 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 80  FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 139

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 140 ESTLHLV 146



 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 156 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 215

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 216 ESTLHLV 222



 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 232 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 292 ESTLHLV 298



 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 308 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 367

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 368 ESTLHLV 374



 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 460 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 519

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 520 ESTLHLV 526



 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 536 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 595

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 596 ESTLHLV 602



 Score =  137 bits (332), Expect = 5e-35
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 612 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 671

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 672 ESTLHLV 678



 Score =  135 bits (326), Expect = 3e-34
 Identities = 65/67 (97%), Positives = 66/67 (98%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLEDGRTLSDYNIQK
Sbjct: 384 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQK 443

Query: 183 ESTLHLV 203
           ESTLHLV
Sbjct: 444 ESTLHLV 450


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score =  126 bits (303), Expect = 2e-31
 Identities = 60/61 (98%), Positives = 61/61 (100%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 4   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

Query: 183 E 185
           E
Sbjct: 64  E 64


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score =  123 bits (297), Expect = 8e-31
 Identities = 59/61 (96%), Positives = 60/61 (98%)
 Frame = +3

Query: 3   FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
           FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLEDGRTLSDYNIQK
Sbjct: 52  FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQK 111

Query: 183 E 185
           E
Sbjct: 112 E 112



 Score = 88.6 bits (210), Expect = 3e-20
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 78  KIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 203
           KIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 42


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
           L GTY   ++F    +V L  VV   HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
           L GTY   ++F    +V L  VV   HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
           L GTY   ++F    +V L  VV   HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
           L GTY   ++F    +V L  VV   HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
           L GTY   ++F    +V L  VV   HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 367 CSPVHSRRRRWILPFSSTL*NLRTASLTFFFLCLIF 260
           C P  S  R + + FS+T   L  A +TF  + L F
Sbjct: 253 CRPTFSAARFYGIDFSNTFLGLVGAVVTFLIVLLQF 288


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 219 HHEASTPGGGWIPSGYCSPR 160
           HH    P GG  P G   PR
Sbjct: 63  HHYGGPPSGGQPPQGMPYPR 82


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 191 GGFLLDIVVREGTSIFQLLSS 129
           GGFLL  VV+ G ++   LSS
Sbjct: 108 GGFLLCKVVKYGQTLGPYLSS 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,147
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)