Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32150
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 203 6e-53
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 201 3e-52
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 200 3e-52
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 132 2e-31
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 132 2e-31
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 132 2e-31
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 132 2e-31
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 132 2e-31
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 132 2e-31
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 132 2e-31
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 132 2e-31
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 132 2e-31
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 132 2e-31
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 132 2e-31
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 132 2e-31
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 132 2e-31
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 132 2e-31
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 132 2e-31
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 132 2e-31
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 132 2e-31
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 130 4e-31
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 130 5e-31
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 124 4e-29
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 108 2e-24
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 82 2e-16
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 64 7e-11
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 63 1e-10
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 56 1e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 2e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 52 2e-07
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 51 5e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 47 7e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 46 2e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 2e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 2e-05
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 46 2e-05
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 46 2e-05
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 46 2e-05
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 45 3e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 45 3e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 44 5e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 44 5e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 1e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 42 2e-04
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 41 4e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 41 6e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 41 6e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 39 0.002
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 38 0.004
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 38 0.004
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 37 0.007
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 36 0.021
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 36 0.021
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 35 0.028
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.037
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 35 0.037
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.15
At1g11970.1 68414.m01383 hypothetical protein 32 0.20
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.35
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 31 0.46
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.1
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.1
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.1
At5g12280.1 68418.m01444 hypothetical protein 29 1.4
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 1.9
At1g47680.1 68414.m05297 hypothetical protein 29 1.9
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 4.3
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 5.7
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 7.5
At2g20130.1 68415.m02352 expressed protein contains Pfam domain,... 27 9.9
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 203 bits (495), Expect = 6e-53
Identities = 99/152 (65%), Positives = 110/152 (72%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTG 362
ESTLHLV Y+ P LAVL+FYKVD +GK+ RL++EC
Sbjct: 64 ESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPS 123
Query: 363 EQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 458
CG G FMA DRHYCGKC +T VFK D+
Sbjct: 124 VSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 201 bits (490), Expect = 3e-52
Identities = 98/150 (65%), Positives = 109/150 (72%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTG 362
ESTLHLV Y+ P LAVL+FYKVD +GK+ RLR+EC
Sbjct: 64 ESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPN 123
Query: 363 EQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 452
CGAG FMA DRHYCGKC T V++ +
Sbjct: 124 ATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 200 bits (489), Expect = 3e-52
Identities = 97/150 (64%), Positives = 109/150 (72%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTG 362
ESTLHLV Y+ P LAVL+FYK+D +GK+ RLR+EC
Sbjct: 64 ESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPN 123
Query: 363 EQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 452
CGAG FMA DRHYCGKC T V++ +
Sbjct: 124 ATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 308 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 367
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 368 ESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKE 95
FVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.5 bits (68), Expect = 0.35
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 73 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 219
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 308 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 367
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 368 ESTLHLV 374
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKE 95
FVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 384 FVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.35
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 73 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 219
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKE 95
FVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 308 FVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.35
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 73 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 219
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 308 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 367
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 368 ESTLHLV 374
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKE 95
FVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 384 FVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.35
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 73 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 219
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKE 95
FVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 308 FVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.35
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 73 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 219
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 292 ESTLHLV 298
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 91.5 bits (217), Expect = 3e-19
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 81 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGG 140
Query: 186 STLHLV 203
S LHLV
Sbjct: 141 SVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 128 bits (310), Expect = 2e-30
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 155 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQK 214
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 215 ESTLHLV 221
Score = 124 bits (300), Expect = 3e-29
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D NIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQK 138
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 139 ESTLHLV 145
Score = 93.5 bits (222), Expect = 8e-20
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 152
FVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 231 FVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 132 bits (318), Expect = 2e-31
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 64 ESTLHLV 70
Score = 94.7 bits (225), Expect = 3e-20
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 81 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGG 140
Query: 186 STLHLV 203
S LHLV
Sbjct: 141 SVLHLV 146
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 130 bits (315), Expect = 4e-31
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 140 ESTLHLV 146
Score = 126 bits (303), Expect = 1e-29
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQK 215
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 216 ESTLHLV 222
Score = 116 bits (279), Expect = 9e-27
Identities = 54/67 (80%), Positives = 62/67 (92%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
F+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN+Q+
Sbjct: 4 FLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQE 63
Query: 183 ESTLHLV 203
+STLHL+
Sbjct: 64 DSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 130 bits (314), Expect = 5e-31
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYNIQK
Sbjct: 82 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQK 141
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 142 ESTLHLV 148
Score = 123 bits (297), Expect = 6e-29
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 158 FVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 217
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 218 ESTLHLV 224
Score = 114 bits (275), Expect = 3e-26
Identities = 58/68 (85%), Positives = 62/68 (91%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDYNIQ 179
FV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DYNIQ
Sbjct: 234 FVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQ 293
Query: 180 KESTLHLV 203
KESTLHLV
Sbjct: 294 KESTLHLV 301
Score = 99.5 bits (237), Expect = 1e-21
Identities = 48/64 (75%), Positives = 56/64 (87%)
Frame = +3
Query: 9 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 188
KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+DY+IQK+S
Sbjct: 8 KTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDS 67
Query: 189 TLHL 200
LHL
Sbjct: 68 ILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 124 bits (299), Expect = 4e-29
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 82 FVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQK 141
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 142 ESTLHLV 148
Score = 113 bits (272), Expect = 7e-26
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYNIQK
Sbjct: 6 YAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQK 65
Query: 183 ESTLHLV 203
ESTLHLV
Sbjct: 66 ESTLHLV 72
Score = 101 bits (241), Expect = 4e-22
Identities = 50/67 (74%), Positives = 56/67 (83%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
F+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY+I K
Sbjct: 555 FIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHK 614
Query: 183 ESTLHLV 203
+STL+LV
Sbjct: 615 KSTLYLV 621
Score = 100 bits (240), Expect = 5e-22
Identities = 52/69 (75%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP--NQQRLIFAGKQLEDGRTLSDYNI 176
FVKTLT K I LEVE DTIENVKA +QDKEGI P N QRLIF GK+L+DG TL+DY+I
Sbjct: 322 FVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSI 381
Query: 177 QKESTLHLV 203
QKESTLHLV
Sbjct: 382 QKESTLHLV 390
Score = 96.3 bits (229), Expect = 1e-20
Identities = 47/66 (71%), Positives = 53/66 (80%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYNI+
Sbjct: 396 FVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRN 455
Query: 183 ESTLHL 200
ESTLHL
Sbjct: 456 ESTLHL 461
Score = 89.4 bits (212), Expect = 1e-18
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +3
Query: 12 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKEST 191
+ TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE GRTL+ YNIQK ST
Sbjct: 249 SFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGST 308
Query: 192 LHLV 203
L+LV
Sbjct: 309 LYLV 312
Score = 85.4 bits (202), Expect = 2e-17
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +3
Query: 9 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 188
+T T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L RTL DYNIQK S
Sbjct: 481 ETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGS 540
Query: 189 TLH 197
T+H
Sbjct: 541 TIH 543
Score = 83.8 bits (198), Expect = 6e-17
Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Frame = +3
Query: 9 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDGRTLSDYNIQK 182
K T T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED RTL+DY I+
Sbjct: 165 KNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRN 224
Query: 183 ESTLHL 200
STL L
Sbjct: 225 RSTLCL 230
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 108 bits (260), Expect = 2e-24
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
F+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL+DYNIQ
Sbjct: 89 FIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQN 148
Query: 183 ESTLHLV 203
+S LHL+
Sbjct: 149 DSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 81.8 bits (193), Expect = 2e-16
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+++
Sbjct: 5 VKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERG 64
Query: 186 STLHLV 203
S LHLV
Sbjct: 65 SVLHLV 70
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 63.7 bits (148), Expect = 7e-11
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
+KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+++
Sbjct: 28 IKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENG 87
Query: 186 STLHLV 203
TLHL+
Sbjct: 88 HTLHLI 93
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 137
F+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 53 FIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
FV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SDYNI+
Sbjct: 144 FVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKP 203
Query: 183 ESTL 194
++ L
Sbjct: 204 DANL 207
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 FVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 179
FV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+
Sbjct: 98 FVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIE 157
Query: 180 KESTLHLV 203
++++L LV
Sbjct: 158 QDASLQLV 165
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 186 STLHLV 203
T+H+V
Sbjct: 82 HTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 186 STLHLV 203
T+H+V
Sbjct: 82 HTVHMV 87
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNI 176
FVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL + N+
Sbjct: 4 FVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEENNV 63
Query: 177 QKES 188
+ S
Sbjct: 64 VENS 67
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 47.2 bits (107), Expect = 7e-06
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I
Sbjct: 4 YIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILF 63
Query: 183 ESTLHL 200
ES L L
Sbjct: 64 ESRLLL 69
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNIQK 182
+K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY++++
Sbjct: 15 IKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHVEE 74
Query: 183 ESTLHLV 203
TL+LV
Sbjct: 75 GHTLYLV 81
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNI 176
VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L + +
Sbjct: 5 VKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKV 64
Query: 177 QKESTL 194
+E L
Sbjct: 65 TEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNI 176
VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L + +
Sbjct: 5 VKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKV 64
Query: 177 QKESTL 194
+E L
Sbjct: 65 TEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNI 176
VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L + +
Sbjct: 5 VKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKV 64
Query: 177 QKESTL 194
+E L
Sbjct: 65 TEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLSDYNI 176
VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL + +
Sbjct: 5 VKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKV 64
Query: 177 QKESTL 194
+E L
Sbjct: 65 TEEGFL 70
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
+ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I E
Sbjct: 5 IDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFE 64
Query: 186 STL 194
S L
Sbjct: 65 SLL 67
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYN 173
FVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 4 FVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENK 63
Query: 174 IQKES 188
+ + S
Sbjct: 64 VAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYN 173
FVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 4 FVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENK 63
Query: 174 IQKES 188
+ + S
Sbjct: 64 VAENS 68
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/66 (30%), Positives = 40/66 (60%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS ++ +
Sbjct: 5 VMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGVKDD 64
Query: 186 STLHLV 203
L ++
Sbjct: 65 DLLMMM 70
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++I +
Sbjct: 5 VENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQN 64
Query: 186 STLHL 200
LHL
Sbjct: 65 PLLHL 69
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 179
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 180 KESTLHLV 203
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 179
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 180 KESTLHLV 203
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 21 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 200
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 201 V 203
+
Sbjct: 604 M 604
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 FVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 179
FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S Q
Sbjct: 12 FVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----Q 67
Query: 180 KESTLHLV 203
++T++LV
Sbjct: 68 PDATVNLV 75
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNIQK 182
VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+ N+Q
Sbjct: 665 VKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQP 724
Query: 183 ESTLHLV 203
S +HL+
Sbjct: 725 NSLVHLI 731
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 182
F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D + I
Sbjct: 4 FFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILN 63
Query: 183 ESTLHL 200
S + L
Sbjct: 64 HSRIQL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNIQK 182
+ L GK L V +++ ++KAK K + ++ + GK+LED ++L++ N+Q
Sbjct: 504 LSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQP 563
Query: 183 ESTLHLV 203
S +HL+
Sbjct: 564 NSLVHLL 570
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDYNI 176
V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 113 VRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLCQ 171
Query: 177 QKESTLHLV 203
++ +HL+
Sbjct: 172 NGDNVIHLL 180
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 6 IENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHN 65
Query: 186 STLHL 200
S + L
Sbjct: 66 SRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 185
++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 40 IENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHN 99
Query: 186 STLHL 200
S + L
Sbjct: 100 SRILL 104
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNI 176
VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+ +
Sbjct: 5 VKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTMEANKV 64
Query: 177 QKESTLHLV 203
+S + ++
Sbjct: 65 FDKSVIAII 73
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 149
F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 4 FFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 3 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 107
FV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 52 FVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 35.1 bits (77), Expect = 0.028
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 134
V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 5 VEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 36 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 149
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 34.7 bits (76), Expect = 0.037
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 134
V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 5 VENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 149
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 15 LTGKTITLEVEPSDTIENVKAKIQDKEGIP 104
L+ K I +E++P D IE +K I+++ GIP
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.5 bits (68), Expect = 0.35
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 36 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 194
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 VKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYNIQ 179
V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 115 VITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKD 174
Query: 180 KESTLHLV 203
S +HL+
Sbjct: 175 GNSVIHLL 182
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 203 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 84
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +3
Query: 51 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 167
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 51 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 176
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 24 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 176
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 182 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 84
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 45 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 200
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 179 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 84
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 51 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 203
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 91 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 195
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
>At2g20130.1 68415.m02352 expressed protein contains Pfam domain,
PF04367: Protein of unknown function (DUF502)
Length = 256
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 212 KPQHQVEGGFLLDIVVREGTSIFQLLSSKDQPLL-IGRDS 96
+P V G ++IVV G S+ Q+LS+ D+PL IG +S
Sbjct: 219 RPNLSVREG--IEIVVSGGMSMPQILSTLDKPLASIGNES 256
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,630,579
Number of Sequences: 28952
Number of extensions: 200738
Number of successful extensions: 712
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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