Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32142
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 320 4e-88
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 320 6e-88
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 319 1e-87
SB_56| Best HMM Match : Actin (HMM E-Value=0) 319 1e-87
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 319 1e-87
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 316 5e-87
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 257 5e-69
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 9e-27
SB_54| Best HMM Match : Actin (HMM E-Value=0) 106 1e-23
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 86 2e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 5e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 44 6e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.004
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.32
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.0
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 3.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 4.0
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 5.3
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 6.9
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4) 27 9.2
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 320 bits (786), Expect = 4e-88
Identities = 148/160 (92%), Positives = 155/160 (96%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH 182
LCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIH
Sbjct: 179 LCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 238
Query: 183 ETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 362
ET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPER
Sbjct: 239 ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPER 298
Query: 363 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 482
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 299 KYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 320 bits (785), Expect = 6e-88
Identities = 148/160 (92%), Positives = 155/160 (96%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH 182
LCYVALDFEQEM TAA+S+S+EKSYELPDGQVITIGNERFRCPEAL QPSFLGMES GIH
Sbjct: 190 LCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIH 249
Query: 183 ETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 362
ET YNSIMKCDVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPER
Sbjct: 250 ETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPER 309
Query: 363 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 482
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 310 KYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 319 bits (783), Expect = 1e-87
Identities = 147/160 (91%), Positives = 155/160 (96%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH 182
LCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIH
Sbjct: 217 LCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 276
Query: 183 ETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 362
ET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPER
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPER 336
Query: 363 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 482
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 319 bits (783), Expect = 1e-87
Identities = 147/160 (91%), Positives = 155/160 (96%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH 182
LCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIH
Sbjct: 216 LCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 275
Query: 183 ETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 362
ET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPER
Sbjct: 276 ETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPER 335
Query: 363 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 482
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 319 bits (783), Expect = 1e-87
Identities = 147/160 (91%), Positives = 155/160 (96%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH 182
LCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIH
Sbjct: 217 LCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 276
Query: 183 ETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 362
ET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPER
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPER 336
Query: 363 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 482
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 316 bits (777), Expect = 5e-87
Identities = 147/160 (91%), Positives = 155/160 (96%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH 182
L YVALDFEQEMATAAAS+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIH
Sbjct: 216 LAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 275
Query: 183 ETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 362
ET YNSIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPER
Sbjct: 276 ETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPER 335
Query: 363 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 482
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 257 bits (629), Expect = 5e-69
Identities = 116/145 (80%), Positives = 132/145 (91%)
Frame = +3
Query: 48 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 227
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 228 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 407
KDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 408 TFQQMWISKEEYDESGPGIVHRKCF 482
TFQQMWI+KEEY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 116 bits (280), Expect = 9e-27
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 29/180 (16%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH 182
LCYV + EQE A +T L + Y LPDG+V+ + ERF PEALFQP + +E G+
Sbjct: 220 LCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVA 279
Query: 183 ETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL--------------- 317
E ++N+I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 280 ELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSS 339
Query: 318 ------APSTI-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 455
P T K KI I P RK+ V++GG++LA + W++++EY+E G
Sbjct: 340 GMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 106 bits (254), Expect = 1e-23
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH 182
LCY A+D+E+E+ A S E Y LPDGQ I IG+ERFR E LFQPS LG + GIH
Sbjct: 2261 LCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIH 2320
Query: 183 ETVYNSIMKCDVDIRKDLYANTVMSG 260
E+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2321 ESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.8 bits (203), Expect = 2e-17
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 17/145 (11%)
Frame = +3
Query: 99 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 275
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 276 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 407
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 408 TFQQMWISKEEYDESGPGIVHRKCF 482
F + +K +YDE GP I F
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 5e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +3
Query: 159 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 338
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 339 KII---APPERKYSVWIGGSILASL 404
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 54.0 bits (124), Expect = 7e-08
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = +3
Query: 165 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 329
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 330 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 449
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 3 LCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 158
+CY++ D +E+ + L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 847 ICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +3
Query: 177 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 281
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 129 PEALFQPSFLGMESCGIHETV 191
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.32
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 173 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 352
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 353 PREEVLRMDRWIHPG 397
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 149 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 322
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 323 LDHQ 334
H+
Sbjct: 954 RKHE 957
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 391 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 254
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +2
Query: 176 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 349
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 350 SPREEVLRMDRWIHP 394
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 243 NTVMSGGTTMYPGIADRMQKEITALAP 323
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +2
Query: 173 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 340
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 341 DHRSPREEVLRMDRWIH 391
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +2
Query: 128 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 307
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 308 HRPRALDHQ 334
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 4.0
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +2
Query: 170 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 343
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 344 -HRSPREEVLRMDRWIHPGFPVHLPADVD 427
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/70 (28%), Positives = 25/70 (35%)
Frame = +2
Query: 170 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 349
V H R V H + H V + V +RRQDA+ + QD DH
Sbjct: 634 VDHHRQDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHRQDVVHPRQDADHH 693
Query: 350 SPREEVLRMD 379
E R D
Sbjct: 694 RQDAEHHRQD 703
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 179 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 349
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 240 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 359
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +2
Query: 173 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 352
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 353 PREEVLRMDRWIH 391
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/73 (26%), Positives = 26/73 (35%)
Frame = +2
Query: 173 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 352
+H R R + RH + RH H R+ R E R+ H+ H
Sbjct: 73 QHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQHERS-RHKTSRHEK 131
Query: 353 PREEVLRMDRWIH 391
R E R +R H
Sbjct: 132 SRHETSRHERSRH 144
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +2
Query: 200 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 373
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 374 MDRWIHP 394
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +2
Query: 170 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 349
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 350 SPREE 364
R+E
Sbjct: 606 DQRDE 610
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 203 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 301
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 134 GSLPAFLP-GYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDA 298
G++ +LP GI + + + H R+H P R HR+ R + +P RY R+ A
Sbjct: 185 GNMQRYLPESIGIPGNMQRYLTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHA 244
Query: 299 E 301
+
Sbjct: 245 K 245
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 240 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 359
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +2
Query: 161 YGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDH 310
Y +++PR R HH +H + H H +HH + Q H
Sbjct: 247 YHKLKNPRHRYHHHHHHHHQH--NHHQHHHHHHHHHHNHHHHHQQHHHHH 294
>SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)
Length = 126
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 284 RRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFP 403
RRQ HR R D +D+D R L DR+ + +P
Sbjct: 4 RRQGTATIHRYRQSDLRDRDRRRVLPRFLEQDRFDNSDYP 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,694,622
Number of Sequences: 59808
Number of extensions: 320280
Number of successful extensions: 1113
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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