Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32139
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog prote... 29 1.5
AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog (hedg... 29 1.5
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 4.6
Z82084-6|CAJ85781.1| 156|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 27 6.0
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 27 6.0
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 27 6.0
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 27 6.0
AC006634-3|AAF39795.3| 535|Caenorhabditis elegans Hypothetical ... 27 6.0
AL031630-10|CAA20990.1| 363|Caenorhabditis elegans Hypothetical... 27 8.0
>AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog protein
WRT-5 protein.
Length = 176
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 186 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 76
PS H+ +YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 5, isoform a protein.
Length = 176
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 186 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 76
PS H+ +YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 2 IKNEIDHRCSSRPCGYRHRCPPY-RGLP*DRSV*IRRQPRWSLQLQFRDFQRHR 160
+KN++ +R SSR G H+ P + R LP D R+ R + Q +F+ + R
Sbjct: 2531 LKNKVHNRRSSRAPGIHHQRPLHPRWLPTDHET-DRKDSRAASQFRFQHMRSKR 2583
>Z82084-6|CAJ85781.1| 156|Caenorhabditis elegans Hypothetical
protein ZK1053.7 protein.
Length = 156
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 228 VRGSYSYTNTDGKPETITYF 287
++ +YSY N DG P + TY+
Sbjct: 112 IKDTYSYDNVDGTPISCTYY 131
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 262 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 375
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 262 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 375
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 262 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 375
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 262 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 375
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AC006634-3|AAF39795.3| 535|Caenorhabditis elegans Hypothetical
protein F35F11.1 protein.
Length = 535
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2
Query: 455 IKLITSNKRMWWMLRHTNPVLRLHYLNLSREFRSLARGGGDLRNRFT 315
+ +ITS +R W + V +H NLS++ +S A GG R+ ++
Sbjct: 247 LDIITSAQRQWDLNEKKEKVAAVHATNLSKD-QSGAAGGQQQRSGYS 292
>AL031630-10|CAA20990.1| 363|Caenorhabditis elegans Hypothetical
protein Y38H6C.11 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 432 ENVVDASPHKSCIKASLLKSIQGI*KFSSWRRRPEE 325
+N D H C K S K+++ KFS W++ PE+
Sbjct: 2 KNKPDLPLHTKCDKMSKKKNLKNR-KFSQWQKLPED 36
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,433,772
Number of Sequences: 27780
Number of extensions: 200846
Number of successful extensions: 628
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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