Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32138
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19555-2|CAA79619.2|  394|Caenorhabditis elegans Hypothetical pr...    63   1e-10
AC024805-5|AAK39339.1|  494|Caenorhabditis elegans Hypothetical ...    30   0.85 
AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical ...    30   0.85 
AL117204-21|CAB55157.1|  712|Caenorhabditis elegans Hypothetical...    30   1.1  
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei...    29   2.0  
AC006632-9|AAK85472.1|  409|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z67884-1|CAA91807.1|  347|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      27   6.0  

>Z19555-2|CAA79619.2|  394|Caenorhabditis elegans Hypothetical
           protein F02A9.4b protein.
          Length = 394

 Score = 62.9 bits (146), Expect = 1e-10
 Identities = 32/115 (27%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
 Frame = +1

Query: 178 RNTFLEWNLEAELYAFGKRLNE-EFDSDLLLQAFTDRTYI----IKEEMKQKEMGVDIPM 342
           R+++  W+ ++ELYAFG R+   E   D  ++A T+ ++     ++E ++  + G ++  
Sbjct: 49  RSSYPNWDYDSELYAFGHRIGAPEISEDQYIKALTNESFFQRADVEENVESAQPGAEVGT 108

Query: 343 KDNMELIAEGEKFINEYVQLYLETVLPKFPLEGVNEVRNYLTNEDRLAKISLSLG 507
           + N EL+  GE+ ++ +++ YL   L K P E +  + ++L +++ LA I+  LG
Sbjct: 109 EHNAELVKRGEQNLSIWLKRYLRFHLAKAPEELIEAIDSHLLDDECLAGIASHLG 163


>AC024805-5|AAK39339.1|  494|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6b protein.
          Length = 494

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 24/84 (28%), Positives = 37/84 (44%)
 Frame = +1

Query: 202 LEAELYAFGKRLNEEFDSDLLLQAFTDRTYIIKEEMKQKEMGVDIPMKDNMELIAEGEKF 381
           L+A +  F +RL+EEFD+   L  F      +  + K  E   D P    ++ IA     
Sbjct: 316 LQARIDEFFRRLHEEFDTRRRLSHFNRLVDDVIHQKKAAEAVEDAPDPMEIDAIASEICM 375

Query: 382 INEYVQLYLETVLPKFPLEGVNEV 453
           +N   ++Y   V  +    G NEV
Sbjct: 376 MNTSAEMYWRFVSRRI---GKNEV 396


>AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6a protein.
          Length = 801

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 24/84 (28%), Positives = 37/84 (44%)
 Frame = +1

Query: 202 LEAELYAFGKRLNEEFDSDLLLQAFTDRTYIIKEEMKQKEMGVDIPMKDNMELIAEGEKF 381
           L+A +  F +RL+EEFD+   L  F      +  + K  E   D P    ++ IA     
Sbjct: 316 LQARIDEFFRRLHEEFDTRRRLSHFNRLVDDVIHQKKAAEAVEDAPDPMEIDAIASEICM 375

Query: 382 INEYVQLYLETVLPKFPLEGVNEV 453
           +N   ++Y   V  +    G NEV
Sbjct: 376 MNTSAEMYWRFVSRRI---GKNEV 396


>AL117204-21|CAB55157.1|  712|Caenorhabditis elegans Hypothetical
           protein Y116A8C.33 protein.
          Length = 712

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/39 (38%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = +1

Query: 346 DNMELIAEGEKFINEYVQLYLET-VLPKFPLEGVNEVRN 459
           ++++L+   + F+NE ++ +LET  +PKF L  VNE+R+
Sbjct: 423 NSLQLLKNNQSFVNETLKRFLETKSVPKF-LITVNELRD 460


>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
            protein.
          Length = 2427

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = +1

Query: 205  EAELYAFGKRLNEEFDSDLLLQAFTDRTYIIKEEMKQK 318
            EA + A  K LN+++D  LL++  T+++Y +KE  KQK
Sbjct: 1583 EAAVSARLKALNDQWD--LLVKTTTEKSYRLKEANKQK 1618


>AC006632-9|AAK85472.1|  409|Caenorhabditis elegans Hypothetical
           protein F28A10.6 protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 370 GEKFINEY-VQLYLETVLPKFPLEGVNEVRNYLTNEDRLAK 489
           G  F+ +Y VQ YL  +     LEG NE+   L + D L K
Sbjct: 363 GYGFLKDYPVQQYLRDIRVHQILEGTNEMMRLLISRDLLTK 403


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
            protein C02F4.1 protein.
          Length = 1781

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 373  EKFINEYVQLYLETVLPKFPLEGVNEVRNYLTNEDRLAKISL 498
            +KF  E  + Y+ TV+     EG+N    ++ NED   +I L
Sbjct: 1021 DKFCVEMWREYMVTVVSFVTQEGLNSKHEWMKNEDEDMRIQL 1062


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
            C02F4.1 protein.
          Length = 1781

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 373  EKFINEYVQLYLETVLPKFPLEGVNEVRNYLTNEDRLAKISL 498
            +KF  E  + Y+ TV+     EG+N    ++ NED   +I L
Sbjct: 1021 DKFCVEMWREYMVTVVSFVTQEGLNSKHEWMKNEDEDMRIQL 1062


>Z67884-1|CAA91807.1|  347|Caenorhabditis elegans Hypothetical
           protein T14G8.2 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +1

Query: 178 RNTFLEWNLEAELYAFGKRLNEEFDSDLLLQAFTDRTYIIKEEMKQKEMGVDIPMKDNME 357
           +N F+   LE  LY   +  NEE  S + L+   +  YI++++  Q          +N +
Sbjct: 117 QNFFMRAKLETILYIATEDRNEERISQMDLKFLKESQYIVRDDASQTIHEYLKMFSNNKQ 176

Query: 358 LIA 366
           L+A
Sbjct: 177 LVA 179


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 373  EKFINEYVQLYLETVLPKFPLEGVNEVRNYLTNEDRLAKISL 498
            +KF  E  + Y+ TV+     EG+N    ++ NED   +I L
Sbjct: 1021 DKFCVEMWREYMVTVVSFVTQEGLNSKHEWMKNEDEDMRIQL 1062


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,138,962
Number of Sequences: 27780
Number of extensions: 176278
Number of successful extensions: 502
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)