Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32134
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   2.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   3.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   8.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 344  WGRLKFFFCFDGVFHDPNK 288
            WG+ + F C  G+  D NK
Sbjct: 1299 WGKYEVFNCAPGLHWDNNK 1317


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 PHSAGLTPYSGHGRHHQN 319
           P S G++PY+    HH +
Sbjct: 40  PLSLGMSPYASSQHHHHH 57


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = +1

Query: 343 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRK 516
           Q KM N       +S  +   +  P K VI++ R L P     ++L  N      KRK
Sbjct: 15  QNKMYNVIQHSPQQSIIVSGSITQPTKTVIQSKRPLAPAPERTSVLVTNNSDLRCKRK 72


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 245 VSSSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPNR 349
           +S SG +P+ +  +PY  +     +K   S C +R
Sbjct: 58  LSPSGNTPNKSSTSPYPPNHPLSGSKHLCSICGDR 92


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 489 IEFQHGLVIGERVQ 448
           IEFQ+GL +G   Q
Sbjct: 261 IEFQYGLSLGNAFQ 274


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 489 IEFQHGLVIGERVQ 448
           IEFQ+GL +G   Q
Sbjct: 262 IEFQYGLSLGNAFQ 275


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 489 IEFQHGLVIGERVQ 448
           IEFQ+GL +G   Q
Sbjct: 262 IEFQYGLSLGNAFQ 275


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 349 KMANTDLTRLLKSDEIRK 402
           K  N DL  ++KSD + K
Sbjct: 27  KYDNVDLDEIIKSDRLLK 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,237
Number of Sequences: 336
Number of extensions: 2289
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)