Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32134
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 173 7e-44
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 171 3e-43
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 31 0.55
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 30 1.3
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 2.9
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 29 2.9
02_04_0073 - 19471254-19472681 28 3.9
01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,266... 28 3.9
03_03_0125 - 14630078-14630136,14630197-14631160 28 5.1
03_03_0122 - 14617879-14618871 28 5.1
03_02_0286 + 7100342-7100504,7100613-7100719,7102109-7102240,710... 28 5.1
01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971... 28 5.1
12_01_0515 + 4081373-4081622,4081725-4081867,4082061-4082219,408... 27 8.9
03_06_0721 - 35742380-35742736,35743206-35743398,35743497-357435... 27 8.9
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 173 bits (421), Expect = 7e-44
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Frame = +1
Query: 1 AVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIP 177
A+ L+++ A++D K S +R GKGKMRNRR I RKGPLI++ + + +AFRN+P
Sbjct: 171 AIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKGPLIVYGTEGSKIVKAFRNLP 230
Query: 178 GVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMA 357
GV+ APGGHLGRFVIWT+SAF +L+ ++G+++ PS +KK F LP+PKMA
Sbjct: 231 GVDVANVERLNLLDLAPGGHLGRFVIWTESAFKKLEEVYGTFEAPSLKKKGFILPRPKMA 290
Query: 358 NTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKR 513
N DL R++ SDE++ V++ NK V R ++ NPL N A+LKLNPY ++
Sbjct: 291 NADLGRIINSDEVQSVVKPLNKEVKRREKRKNPLKNVAAVLKLNPYFGTARK 342
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 171 bits (416), Expect = 3e-43
Identities = 82/168 (48%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
Frame = +1
Query: 13 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEX 189
L+++ A++D K S +RAGKGKMRNRR I RKGPLI++ + + +AFRN+PGV+
Sbjct: 174 LKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKGPLIVYGTEGSKVVKAFRNLPGVDV 233
Query: 190 XXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDL 369
APGGHLGRFVIWT+ AF +LD ++G + TP+ +KK F LP+PKMAN DL
Sbjct: 234 ANVERLNLLDLAPGGHLGRFVIWTECAFKKLDEVYGGFDTPALKKKGFVLPRPKMANADL 293
Query: 370 TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKR 513
+RL+ SDE++ V++ NK V + NPL N A+LKLNPY ++
Sbjct: 294 SRLINSDEVQSVVKPINKEVKLREARRNPLKNVAAVLKLNPYFGTARK 341
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 31.1 bits (67), Expect = 0.55
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 209 TS*SWLREVILDVSSSGLSPHSAGLTPYSGHGRHHQNKRR----TSTCPNRRWPTLTSHV 376
+S S+LR + LD+SSS +P S+ H HHQ + S+ P WP
Sbjct: 376 SSSSFLRCLGLDMSSSSSAPPSSSGQQQQHHHHHHQETMQVPLPASSLP--EWPPRLQPE 433
Query: 377 FSSLMRSGRSSVLPTNA 427
S ++ SG LP +A
Sbjct: 434 PSPMLSSGLGLGLPYDA 450
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 223 APG--GHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANT 363
APG G GR+V+ SA LDP F SW S++ K F++ + A++
Sbjct: 670 APGVDGCSGRYVV-AASAGNALDPGFCSWDYYSREAKAFHIEEISHASS 717
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -1
Query: 135 EDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 4
ED +GS+ + DTT++ + +L++ ++L LV +K ++P L E+D
Sbjct: 236 EDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 288 GVKPAECGLSPDDETSKMTSRSQLQEVQLVNIQELHTGDVA 166
G+ A G++ DD+ K SR L + ++N+ +GD A
Sbjct: 147 GLSCARGGVASDDDDDKQASRRALPPMPVLNLSSDSSGDAA 187
>02_04_0073 - 19471254-19472681
Length = 475
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 263 SPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMR 394
+P G +P S HG HH++++ T N + L V ++R
Sbjct: 20 APRPRGASPLSSHGHHHRSRKIHRTFNNVKITVLCGLVTILVLR 63
>01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,
2668344-2668410,2668473-2668562,2668672-2668787,
2668999-2671924
Length = 1170
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = -1
Query: 216 QEVQLVNIQELHTGDVAESASQTLILVEDYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDI 37
Q L++++ LH D + + L+ED + ++ + T V + +T+ LV+LK
Sbjct: 937 QAENLISLKRLHMVDCQNAKQFRMCLLEDQQLAVDVVTVVVESRVARAKETVVLVYLKCY 996
Query: 36 R 34
R
Sbjct: 997 R 997
>03_03_0125 - 14630078-14630136,14630197-14631160
Length = 340
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 241 GRFVIWTQSAFGRL-DPLFGSWK 306
G FV+W AFG L L G+WK
Sbjct: 127 GGFVVWADRAFGPLAGSLLGTWK 149
>03_03_0122 - 14617879-14618871
Length = 330
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 241 GRFVIWTQSAFGRL-DPLFGSWK 306
G FV+W AFG L L G+WK
Sbjct: 124 GGFVVWADRAFGPLAGSLLGTWK 146
>03_02_0286 +
7100342-7100504,7100613-7100719,7102109-7102240,
7102383-7102539,7103099-7103220
Length = 226
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = -1
Query: 273 ECGLSPDDETSKMTSRSQLQEVQLVNIQELHTGDVAESASQTLILVEDYEGSLTLDTTTV 94
E G PD + + +T R +++ + +G+V E+ + + D ++ LDT
Sbjct: 50 ESGTQPDIDLATITDRMEVKRA-------VQSGNVQEAIEK----INDLNPTI-LDTNPQ 97
Query: 93 AHFTLTSTKTLRLVHLKDIRPCLEAPQED 7
+F L K + L+ I LE QE+
Sbjct: 98 LYFHLQQQKLIELIRAGKINEALEFAQEE 126
>01_06_0160 -
27095727-27096008,27096164-27096652,27096983-27097132,
27097656-27097920,27097995-27098274,27100311-27100388,
27100597-27101240,27101334-27101412,27101489-27101612,
27101782-27101882,27102870-27103068
Length = 896
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 273 ECGLSPDDETSKMTSRSQLQEVQ 205
+CG+ PD+ S++ S+ QEV+
Sbjct: 51 DCGMDPDEAVSRLLSQDTFQEVK 73
>12_01_0515 +
4081373-4081622,4081725-4081867,4082061-4082219,
4082339-4082518,4082616-4082845,4082959-4083099,
4083366-4083420
Length = 385
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/71 (19%), Positives = 30/71 (42%)
Frame = +1
Query: 247 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 426
FV+W ++ ++ + +W T K+ + + L + D + K + +KR
Sbjct: 303 FVVWQRNMIAVIEGGYPNWGTTVKKLDSAVYVAEDYSKDSLDNIFDEDMMSKYINGSHKR 362
Query: 427 VIRATRKLNPL 459
++ R N L
Sbjct: 363 KMKKPRGKNSL 373
>03_06_0721 -
35742380-35742736,35743206-35743398,35743497-35743552,
35745951-35746727
Length = 460
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/31 (32%), Positives = 23/31 (74%)
Frame = -1
Query: 255 DDETSKMTSRSQLQEVQLVNIQELHTGDVAE 163
D E+S + ++ QL E +L+N++++ GD+++
Sbjct: 286 DVESSGVPAKLQLLEQELINLEKIGNGDLSK 316
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,149,070
Number of Sequences: 37544
Number of extensions: 295062
Number of successful extensions: 835
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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