Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32132
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.92 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   0.92 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.92 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   4.9  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 41  PADFYHVHHHQ 9
           P D  HVHHHQ
Sbjct: 128 PTDNSHVHHHQ 138


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 359 WFDEIVVTRKREEISNLLKSLMNKYNP 439
           W D   V RK +EIS L KS++   +P
Sbjct: 231 WTDVSNVKRKSKEISKLPKSMLAISDP 257


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 359 WFDEIVVTRKREEISNLLKSLMNKYNP 439
           W D   V RK +EIS L KS++   +P
Sbjct: 231 WTDVSNVKRKSKEISKLPKSMLAISDP 257


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 362 FDEIVVTRKREEISNLLKSLMNKYNPDSHL 451
           F ++ +T K      ++ + ++KY P  HL
Sbjct: 129 FAKVKLTNKSNGNGQIMLNSLHKYKPTVHL 158


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 5   DSDDDEHDKSPLENK 49
           D DDD+ D S  EN+
Sbjct: 289 DDDDDDDDMSNSENQ 303


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 119 KNQISICRVV*LVHFYYNTVEVPF 48
           K  I +  V   VHFYY    + F
Sbjct: 98  KTGICVSNVFDFVHFYYPVATMSF 121


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = +3

Query: 210 SIRTISKGVALKYLSKTILQIVAYIYYSMLSSFS 311
           ++ ++SK  AL+     + ++   ++ + LSS S
Sbjct: 380 TVSSVSKPEALRLSGSVVTKVTCELFQATLSSSS 413


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,665
Number of Sequences: 336
Number of extensions: 2466
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)