Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32132
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 60 3e-10
SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo... 30 0.24
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 29 0.55
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.55
SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S... 29 0.55
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 27 1.3
SPAC1952.15c |rec24|mug6|meiotic recombination protein Rec24|Sch... 27 2.2
SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces po... 26 2.9
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 26 3.8
SPAC1952.13 |ned1||lipin|Schizosaccharomyces pombe|chr 1|||Manual 25 5.1
SPACUNK4.17 |||NAD binding dehydrogenase family protein|Schizosa... 25 6.7
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 25 6.7
SPAC25B8.17 |||peptidase family A22|Schizosaccharomyces pombe|ch... 25 6.7
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 6.7
SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces pomb... 25 8.9
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 25 8.9
SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos... 25 8.9
SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy... 25 8.9
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 59.7 bits (138), Expect = 3e-10
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +2
Query: 5 DSDDDEHDKSPLENKMEPQQCCSKNEPI--KQPCILIFDSLAGASRSRVVATLRDYLTCE 178
D+ +E D+ + + +P ++ + P ILIFDSLA + + LR+YL E
Sbjct: 470 DTKLEEQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKG-ALNYLREYLLEE 528
Query: 179 -YHVKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDP 319
+ K LK +I+G K+PQQ+NF+DCG+Y L +VE F + P
Sbjct: 529 AFERKNVHLK---STDIRGFHAKVPQQSNFSDCGIYALHFVELFLETP 573
>SPBC19G7.09 |ulp1||SUMO deconjugating enzyme
Ulp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 568
Score = 29.9 bits (64), Expect = 0.24
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 FDSLAGASRSRVVATLRDYLTCEYH--VKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGLY 283
+DSLAG S +V LRDY E V VS + F DN P+Q N DCG++
Sbjct: 479 WDSLAG-SPGKVFDLLRDYYIAETKGAVDVSDWENFMDDNS-------PRQRNGHDCGVF 530
Query: 284 LLQYVE 301
+ E
Sbjct: 531 ACKTAE 536
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 28.7 bits (61), Expect = 0.55
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 86 IKQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNF 265
+ PC D++ RVV + T +H +P++++NK G + P Q
Sbjct: 7 VSAPCFAFVDTIGSIGVCRVVR----FTT--FHN--TPIEVYNKKVNDGVWKRDPYQETA 58
Query: 266 TDCGLYLLQYVEQFFKDPITDYTLPIKQ--LTNWFDEIVVTRKREEISNLLKSL 421
L +E + + PIT ++P ++ + +W + R++ L SL
Sbjct: 59 VKAINRLYTELESYTQPPITQDSMPAEKGSILSWISPLKKMFSRKKSPTLTSSL 112
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 0.55
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 308 FKDPITDYTLPIKQLTNWFDEIVVTRK--REEISNLLKSLMNKYNPD 442
FKD T+ + PI+ T + D++ + + EE +L++ +N+ NPD
Sbjct: 1097 FKDQATETSHPIRLYTRYIDKVYIMFRFTDEESRDLIQRFLNE-NPD 1142
>SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor
Vma6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 28.7 bits (61), Expect = 0.55
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 177 NTMLKYLLSKYSIRTISKGVALKYLSKTILQIVAYIYYSML 299
N+++ ++ TISKGV LKYL +TI V+ IY L
Sbjct: 608 NSIVIFIDENSEASTISKGVVLKYL-ETISYKVSIIYLEKL 647
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/88 (21%), Positives = 37/88 (42%)
Frame = +2
Query: 170 TCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQ 349
T + ++ + L I K + +K PQQ N DCGL++ + + +P
Sbjct: 195 TNDCNLAIKNLGILLKKEFRVRHMKTPQQINDCDCGLHVCENTRILMYRLLQKPYVPKVD 254
Query: 350 LTNWFDEIVVTRKREEISNLLKSLMNKY 433
+ + R R+ + ++ SL+ Y
Sbjct: 255 MNLDHSVVDSVRLRKALMEVITSLLAAY 282
>SPAC1952.15c |rec24|mug6|meiotic recombination protein
Rec24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 350
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 62 QCCSKNEPIKQPCILIFDSLAGASRSRVVATLRDYLTCE 178
+C I PC+ FD+ ++ S+ V LRD +T E
Sbjct: 278 ECFFSYAEIYFPCLHSFDAQLSSAASKCVQILRDIITNE 316
>SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 380 TRKREEISNLLKSLMNKYNPDSHLTLPDITF 472
TRK ++++ S +NKY P SHL LP I +
Sbjct: 119 TRKFRYLNSI--SDLNKYIPLSHLKLPPIVY 147
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 168 LLVNTMLKYLLSKYSIRTISKGVALKY 248
+ ++T KY+L KYSI T S +A Y
Sbjct: 411 IFMSTCYKYVLGKYSIPTESCFIATPY 437
>SPAC1952.13 |ned1||lipin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 656
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 182 HVKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFF 310
HV+V P +IF ++ +++ Q++ +Y+ + V+ FF
Sbjct: 517 HVRVPPTRIFTINSAGEVHIELLQRSGHRSSYVYMNELVDHFF 559
>SPACUNK4.17 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 25.0 bits (52), Expect = 6.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 159 ETILLVNTMLKYLLSKYSIRTISKGVALKYLSKTILQIVAYIYYS 293
E+++ V ML+YL + + I K LK +S AYI+ S
Sbjct: 179 ESVISVGYMLRYLKTVQKAKEIIKEKNLKVVSTVAKYNSAYIHNS 223
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 89 KQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKD 220
K+PC +I +AG+ ++ T L H K P I N D
Sbjct: 6 KKPCAIIVVGMAGSGKT----TFMQQLNAHLHSKNKPPYILNLD 45
>SPAC25B8.17 |||peptidase family A22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 295
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 LVNTMLKYLLSKYS-IRTISKGVALKYLSKTILQIVAYIYYSMLS 302
L+N L L + + + +AL+YLSK +Q++ Y S+ S
Sbjct: 32 LINKRLAVLFPIFGGVTLVLMYLALRYLSKEYIQLILQGYASLAS 76
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 311 KDPITDYTLPIKQLTNWFDEIVVTRKREEISNLLKSLM 424
K I +Y++ K L WF ++ EE+ +L ++
Sbjct: 2351 KQTIEEYSINKKYLMQWFASVIHVFSGEELQPVLSEII 2388
>SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 8.9
Identities = 19/84 (22%), Positives = 39/84 (46%)
Frame = +2
Query: 179 YHVKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTN 358
YH++ +P K+ KD++ G L +N L+ Y EQ P+ ++ K+
Sbjct: 141 YHLEFNPPKVPMKDDVTGEPLIQRSDDNADALRKRLVTYHEQ--TTPVVEF---YKKKGK 195
Query: 359 WFDEIVVTRKREEISNLLKSLMNK 430
W + +K E++ + +++ K
Sbjct: 196 W-AAVDAAQKPEQVWEQIVAILEK 218
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 24.6 bits (51), Expect = 8.9
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 407 LLKSLMNKYNPDS--HLTLPDITFPTLNGKLIESEDN 511
+L++L N Y+PDS HL L ++ P K + EDN
Sbjct: 449 ILENLDNLYDPDSHVHLILQELGEPC---KSVPQEDN 482
>SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +3
Query: 171 LVNTMLKYLLSKYSIRT------ISKGVALKYLSKTILQIVAYIYYSMLSSFSR 314
L+ ++Y +++Y+ + I K + + Y TILQI+ Y+ Y + + ++
Sbjct: 280 LLRRYVRYFIAEYTFASTLRHPNIIKVLDIIYKRHTILQIIEYVPYDLFTFITK 333
>SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1010
Score = 24.6 bits (51), Expect = 8.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 320 ITDYTLPIKQLTNWFDEIVVTRK-REEISNLLKSLMNKYNPDS 445
++D T P + D++ REEI+ LKS NK++ +S
Sbjct: 967 LSDATDPFNRTPLTLDDVTPNDTLREEINTFLKSKRNKHSRNS 1009
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,999,567
Number of Sequences: 5004
Number of extensions: 38586
Number of successful extensions: 132
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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