SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32132
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1047 + 25666113-25666442,25666606-25666651,25667042-256671...    51   6e-07
05_02_0100 + 6594787-6594878,6595443-6595728,6595809-6595887,659...    45   3e-05
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175...    39   0.002
01_06_0641 - 30782235-30782423,30782498-30782605,30782848-307829...    37   0.008
11_01_0712 - 5844291-5844474,5844722-5844777,5844861-5844959,584...    33   0.14 
08_02_1240 + 25504789-25504794,25505421-25505555,25505854-255059...    31   0.42 
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289...    31   0.42 
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127...    31   0.73 
02_02_0348 - 9233032-9233154,9233233-9233311,9233387-9233511,923...    30   0.96 
08_01_0150 - 1179147-1179899,1180025-1180579                           29   1.7  
07_03_1472 - 26753070-26753177,26753254-26753531,26753691-267538...    29   2.2  
10_01_0194 + 2130274-2131725                                           29   2.9  
07_01_0985 - 8297560-8297610,8297728-8297939,8298327-8298449,829...    29   2.9  
03_02_0969 - 12795413-12795475,12795672-12795744,12796011-127961...    28   3.9  
12_02_0142 - 14306325-14306490,14306584-14306687,14306788-143069...    27   6.8  
06_01_0159 + 1193479-1194435,1194509-1194652,1194735-1194821,119...    27   6.8  
06_01_0158 - 1186903-1187013,1187108-1187197,1187504-1187590,118...    27   6.8  
05_04_0186 + 18866762-18866949,18867207-18867345,18868068-188682...    27   6.8  
01_06_1351 - 36510599-36510712,36510802-36510877,36510954-365112...    27   6.8  
10_01_0207 - 2219247-2219902,2220203-2221156,2223739-2224897           27   8.9  
10_01_0192 + 2125986-2127294,2127463-2127506                           27   8.9  
08_02_1386 + 26646156-26646407,26646506-26646612,26646921-266470...    27   8.9  
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615...    27   8.9  
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749...    27   8.9  
02_02_0593 + 11964580-11964831,11964930-11965036,11965345-119654...    27   8.9  
01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-70...    27   8.9  
01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-70...    27   8.9  

>12_02_1047 +
           25666113-25666442,25666606-25666651,25667042-25667130,
           25667291-25667493,25667807-25667949,25668286-25668332,
           25668794-25668870,25668952-25668981,25669068-25669163,
           25669489-25669591,25669959-25670041,25670204-25670326,
           25670465-25670576,25670791-25670898,25671006-25671593
          Length = 725

 Score = 50.8 bits (116), Expect = 6e-07
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
 Frame = +2

Query: 65  CCSKNEPIKQPCILIFDSLAGASRSRVVATLRDYLTCEY-HVKVSP---LKIFNK----- 217
           C    E    P IL  DSL   S +++  T+R YL  E+ H++ +P   + I        
Sbjct: 425 CFPSKESNSGPIILHLDSLELHSSAKIFDTVRRYLEAEWCHLRKNPPPDISISETIWDDL 484

Query: 218 -DNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQL--TNWFDEIVVTRK 388
             NI+   +++PQQ N  DCG+++L Y+E+F +     +T     +   +WF     +  
Sbjct: 485 PSNIQKEKVQVPQQKNEYDCGIFMLYYIERFIRLAPERFTRDNLSMFSRSWFQPEDASDL 544

Query: 389 REEISNLLKSLMNKYNPDSHLTLPD 463
           R+ I  LL         D  L+  D
Sbjct: 545 RQRIRELLLEEFESARLDEALSEAD 569


>05_02_0100 +
           6594787-6594878,6595443-6595728,6595809-6595887,
           6595964-6596013,6597281-6597478,6597555-6597612,
           6598388-6598496,6599253-6599321,6599684-6599812,
           6599970-6600082,6600386-6600479,6602827-6602917,
           6604145-6604233,6604715-6604856,6605849-6606196,
           6606314-6607408
          Length = 1013

 Score = 45.2 bits (102), Expect = 3e-05
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 239 LKIPQQNNFTDCGLYLLQYVEQFFKD-PITDYTLPIKQLTN-----WFDEIVVTRKREEI 400
           +++PQQ+N  DCGL+LL YVE F  D P +   L I    N     WF     + KR  I
Sbjct: 492 VQLPQQDNSFDCGLFLLHYVELFLMDTPRSFNPLKIDSFANYLSDDWFPPAEASLKRSLI 551

Query: 401 SNLLKSLMNKYNPD 442
             L+  L+ + + D
Sbjct: 552 RKLIHKLLKEPSQD 565


>06_03_0091 -
           16515330-16515548,16515669-16515779,16517483-16517524,
           16518067-16518181,16518820-16518914,16519916-16520015,
           16521169-16521264,16522276-16522349,16524581-16524629,
           16525414-16525483,16525553-16525652,16525721-16525779,
           16526633-16526684,16527199-16527405
          Length = 462

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
 Frame = +2

Query: 233 SC-LKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTN-----WFDEIVVTRKRE 394
           SC +++PQQ+N  DCG+++L Y+ +F ++      L  K  +N     WF     +  R+
Sbjct: 349 SCTVQVPQQDNEYDCGVFVLYYMRRFIEE--APERLNNKDSSNMFGEGWFQREEASALRK 406

Query: 395 EISNLLKSLMNKYNPDSHLTLP 460
           E+  LL  L  +   ++H+  P
Sbjct: 407 EMQALLLRLFEEAKDNNHMRDP 428


>01_06_0641 -
           30782235-30782423,30782498-30782605,30782848-30782959,
           30783429-30783526,30784249-30784336,30784780-30784875,
           30785101-30785171,30786003-30786075,30787023-30787324,
           30787418-30787503,30788024-30788084,30789386-30789688
          Length = 528

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +2

Query: 221 NIKGSCLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQL--TNWFDEIVVTRKRE 394
           NI    +++P Q N  DCG+++L Y+E+F ++     T     +    WFD    +  R+
Sbjct: 423 NINKEKVQVPSQRNKYDCGIFMLHYIERFIQEAPERLTRENLCMFGRKWFDPKETSGLRD 482

Query: 395 EISNLL 412
            I  L+
Sbjct: 483 RIRALM 488


>11_01_0712 -
           5844291-5844474,5844722-5844777,5844861-5844959,
           5845056-5845137,5845626-5845760,5845844-5846011,
           5846127-5846310,5848114-5848189
          Length = 327

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = +2

Query: 89  KQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQ--QNN 262
           K P +L+ DSL   + +R+ + ++ ++   +  +    +  N+  I   CL+ P+  Q N
Sbjct: 164 KGPRMLLLDSLKTTNPTRLRSNIKRFIADIFKTEE---REENEQFINKICLEFPEVPQQN 220

Query: 263 FTDCGLYLLQYVEQFFKD 316
             +CG+Y+L ++  F ++
Sbjct: 221 GDECGIYVLYFIYCFLQN 238


>08_02_1240 +
           25504789-25504794,25505421-25505555,25505854-25505964,
           25506091-25506183,25506264-25506884,25506970-25507143,
           25507239-25507464,25507560-25507651,25507744-25507842,
           25507936-25507984,25508071-25508124,25508312-25508484,
           25508561-25508632,25508713-25508808,25509032-25509048,
           25509704-25509875,25509973-25510071,25510381-25510484,
           25510940-25511126,25511212-25511220
          Length = 862

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +2

Query: 245 IPQQNNFTDCGLYLLQYVE 301
           +P+QNN  DCG++ L+Y+E
Sbjct: 792 VPRQNNLFDCGVFTLKYME 810


>08_02_0747 -
           20728073-20728081,20728167-20728353,20728810-20728913,
           20729008-20729139,20729583-20729810,20730263-20730358,
           20730440-20730511,20730588-20730760,20730947-20731000,
           20731086-20731134,20731228-20731326,20731420-20731511,
           20731607-20731832,20731927-20732100,20732186-20732809,
           20732890-20733033,20733108-20733218,20733516-20733650,
           20733963-20733989
          Length = 911

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +2

Query: 245 IPQQNNFTDCGLYLLQYVE 301
           +P+QNN  DCG++ L+Y+E
Sbjct: 841 VPRQNNLFDCGVFTLKYME 859


>01_03_0259 -
           14312197-14312259,14312384-14312456,14312651-14312754,
           14313073-14313192,14313278-14313364,14313925-14314023,
           14314110-14314203,14314298-14314368,14315258-14316040
          Length = 497

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +2

Query: 113 DSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLK-IPQQNNFTDCGLYLL 289
           DSL G+   + + TL  YL  E  VK    +  +  + K   +K +P Q N  DCG+++L
Sbjct: 405 DSL-GSMDMKALRTLARYLVDE--VKDKSGQHIDALSWKQEGVKNLPLQENGWDCGMFML 461

Query: 290 QYVEQFFKD 316
           +Y++ + +D
Sbjct: 462 KYIDFYSRD 470


>02_02_0348 -
           9233032-9233154,9233233-9233311,9233387-9233511,
           9233597-9233734,9233802-9233993,9235269-9237209
          Length = 865

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +2

Query: 239 LKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTNWFDEI--VVTRKREEISNLL 412
           +K+PQQ++   CGL+ L++++ +            K+L+  F+E+    T K +  +NL+
Sbjct: 791 MKVPQQSDSWSCGLHTLKFIQHWNG----------KELSPEFNEMDTTTTFKHKVAANLI 840

Query: 413 KSLMNK 430
            S MN+
Sbjct: 841 NSTMNE 846


>08_01_0150 - 1179147-1179899,1180025-1180579
          Length = 435

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = +2

Query: 5   DSDDDEHDK----SPLENKMEPQQCCSKNEP 85
           D DDD+HD     S  + K E   CCSK  P
Sbjct: 163 DDDDDDHDTRLSISAADPKQERMACCSKEYP 193


>07_03_1472 -
           26753070-26753177,26753254-26753531,26753691-26753865,
           26754974-26755468
          Length = 351

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 236 CLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLT-NWFDEIVVTRKREEISNLL 412
           CL  P+     +C + LL++  +   D I  +T+P+ +L     + + +TRK+     ++
Sbjct: 142 CLIGPRLVMLLNCSVRLLKFGWKMEADGIRPFTMPLMKLACTALERVPLTRKK-----II 196

Query: 413 KSLMNKYNPD 442
            +LM K++ D
Sbjct: 197 DNLMKKFHQD 206


>10_01_0194 + 2130274-2131725
          Length = 483

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 171 LVNTMLKYLLSKYSIRTISKGVALKYLSKTILQIVAYI 284
           L +  + +LLSKYS   IS+   L+ L + +L+I A +
Sbjct: 12  LFSRFISFLLSKYSSHEISEDKQLERLQQLLLRICAVV 49


>07_01_0985 -
           8297560-8297610,8297728-8297939,8298327-8298449,
           8298763-8298817,8299940-8300077,8300187-8300261,
           8300339-8300398,8301335-8301392,8301948-8302054,
           8302484-8302558,8302643-8302838,8304222-8304301,
           8308887-8309757,8310672-8310679
          Length = 702

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 5   DSDDDEH--DKSPLENKMEPQQCCSKNEPIKQPCILIFDSLAGAS 133
           D DDDE   D    EN+ E  Q C   +P++      +DS A AS
Sbjct: 208 DDDDDEEVWDDEKEENEEEEPQLCPNCDPLEVDSDSSYDSDAAAS 252


>03_02_0969 -
           12795413-12795475,12795672-12795744,12796011-12796114,
           12796374-12796493,12796591-12796683,12797813-12797911,
           12798074-12798167,12798254-12798333,12798817-12799347
          Length = 418

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 245 IPQQNNFTDCGLYLLQYVE 301
           IP Q N  DCG+++L+Y++
Sbjct: 368 IPLQQNGWDCGMFMLKYID 386


>12_02_0142 -
           14306325-14306490,14306584-14306687,14306788-14306967,
           14307155-14307253,14307346-14307535,14307722-14307748,
           14308190-14308506,14308532-14308675,14308799-14308905,
           14309085-14309357,14309470-14309827
          Length = 654

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 248 PQQNNFTDCGLYLLQYVEQF 307
           P Q+N  DCG + L+Y+E +
Sbjct: 595 PVQSNLFDCGFFSLRYIENW 614


>06_01_0159 +
           1193479-1194435,1194509-1194652,1194735-1194821,
           1194910-1195244,1195600-1195840,1195921-1195995,
           1196072-1196157,1196591-1196663,1196805-1197535,
           1197613-1197784,1197862-1197948,1198255-1198344,
           1198439-1198549
          Length = 1062

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 266 TDCGLYLLQYVEQFFKDPITDYTLPIKQLTN 358
           +DCG Y+L Y+E+F +  I D    I +  N
Sbjct: 643 SDCGFYMLLYMERFGRMKIDDINEDIYENPN 673


>06_01_0158 -
           1186903-1187013,1187108-1187197,1187504-1187590,
           1187668-1187839,1187917-1188647,1188789-1188861,
           1189295-1189380,1189455-1189529,1189610-1189643,
           1190331-1190622,1191073-1191439
          Length = 705

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 266 TDCGLYLLQYVEQFFKDPITDYTLPIKQLTN 358
           +DCG Y+L Y+E+F +  I D    I +  N
Sbjct: 286 SDCGFYMLLYMERFGRMKIDDINEDIYENPN 316


>05_04_0186 +
           18866762-18866949,18867207-18867345,18868068-18868295,
           18869023-18869081,18869411-18869482,18870239-18870287,
           18870431-18870661,18872018-18872187,18872274-18872478,
           18872826-18873494,18873592-18873819,18873901-18874689
          Length = 1008

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 254 QNNFTDCGLYLLQYVEQFFKDPITDY 331
           + +FTD G Y +QY E FFKD    Y
Sbjct: 566 KGDFTD-GPYEIQYPESFFKDSFYKY 590


>01_06_1351 -
           36510599-36510712,36510802-36510877,36510954-36511210,
           36511300-36511398,36511477-36511675,36511759-36511972,
           36512127-36512195,36512283-36512607,36512722-36512892,
           36512972-36513136,36513212-36513848,36513915-36513976,
           36514237-36514308,36514912-36514947,36515017-36515145
          Length = 874

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 245 IPQQNNFTDCGLYLLQYVEQF 307
           IP+Q N  DCG Y+  Y+  +
Sbjct: 806 IPEQQNGDDCGFYVFNYMVNY 826


>10_01_0207 - 2219247-2219902,2220203-2221156,2223739-2224897
          Length = 922

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 171 LVNTMLKYLLSKYSIR-TISKGVALKYLSKTILQI 272
           LV   + YL+SKYS R  IS+   LK L + +L++
Sbjct: 401 LVTRFISYLMSKYSRRHEISEEKQLKRLQQLLLRV 435


>10_01_0192 + 2125986-2127294,2127463-2127506
          Length = 450

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 171 LVNTMLKYLLSKYSIRTISKGVALKYLSKTILQI 272
           +V+  + +LLSKYS   IS+   L+ L + +L++
Sbjct: 12  IVSRFISFLLSKYSSHEISEEKQLERLQQLLLRV 45


>08_02_1386 +
           26646156-26646407,26646506-26646612,26646921-26647053,
           26647162-26647356,26647906-26648259
          Length = 346

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +2

Query: 122 AGASRSRVVATL--RDY-LTCEYHVKVSPLKIFNKDNIK 229
           AGA+ S +VA L  +D+ +TCE    V  L IF+KD ++
Sbjct: 79  AGATLSTLVARLDSKDWVMTCEALNNVRQLAIFHKDRLQ 117


>08_02_1143 +
           24659105-24659386,24660171-24660272,24661259-24661521,
           24661775-24661874,24662080-24662238,24662327-24663147,
           24663299-24663618,24665831-24667398
          Length = 1204

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 248 PQQNNFTDCGLYLLQYVE 301
           P+QNN T+C LY+++  E
Sbjct: 641 PKQNNGTECALYMIKCAE 658


>07_01_0893 +
           7484598-7484744,7484837-7484902,7494387-7494530,
           7494860-7495235,7495904-7496017,7496282-7496454,
           7496562-7496669,7497311-7497377,7497791-7497904,
           7498121-7498257,7498727-7498813,7498962-7498986,
           7499044-7499266,7499770-7499947,7500039-7500152,
           7500249-7500380,7500488-7500588,7500720-7500933
          Length = 839

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +2

Query: 242 KIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTNWFDEIVVTRKREEISNLLKSL 421
           +I +QNN  DCG+Y ++ +E         +  P   L +      +   R++I+N L  L
Sbjct: 762 QITRQNNGHDCGIYAMKCME---------WWNPRMHLKDMIRPEYIPNMRKQIANDL--L 810

Query: 422 MNKYNPDSHLTLPDITF-PTLNGK 490
            ++YN      +   +F PT +GK
Sbjct: 811 FSEYNSQEEAKILARSFNPTKHGK 834


>02_02_0593 +
           11964580-11964831,11964930-11965036,11965345-11965477,
           11965586-11965780,11966330-11966683
          Length = 346

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +2

Query: 122 AGASRSRVVATL--RDY-LTCEYHVKVSPLKIFNKDNIK 229
           AGA+ S +VA L  +D+ +TCE    V  L IF+KD ++
Sbjct: 79  AGATLSTLVARLDSKDWVMTCEALNNVRQLAIFHKDRLQ 117


>01_01_0090 +
           706340-707296,707370-707513,707596-707682,707771-708105,
           708462-708702,708783-708857,708932-709017,709451-709523,
           709637-709961,710092-711750,711938-713322
          Length = 1788

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 266 TDCGLYLLQYVEQFFKDPITD 328
           +DCG Y+L Y+E+F +  I D
Sbjct: 643 SDCGFYMLLYMERFGRMKIDD 663


>01_01_0089 -
           699533-699643,699738-700046,700134-700220,700298-700469,
           700547-701373,701487-701559,701993-702078,702153-702227,
           702308-702548,702905-703239,703328-703414,703497-703640,
           703714-704670
          Length = 1167

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 266 TDCGLYLLQYVEQFFKDPITD 328
           +DCG Y+L Y+E+F +  I D
Sbjct: 643 SDCGFYMLLYMERFGRMKIDD 663


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,647,362
Number of Sequences: 37544
Number of extensions: 206093
Number of successful extensions: 630
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -