Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32132
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48563| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_47643| Best HMM Match : Peptidase_C48 (HMM E-Value=1.5e-05) 29 3.0
SB_44896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_6866| Best HMM Match : Peptidase_C48 (HMM E-Value=0.045) 28 4.0
SB_41291| Best HMM Match : Piwi (HMM E-Value=0) 28 4.0
SB_57117| Best HMM Match : Peptidase_C48 (HMM E-Value=8.4e-05) 28 5.3
SB_51235| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00046) 28 5.3
SB_5912| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-08) 28 5.3
SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_18764| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_18047| Best HMM Match : Pkinase (HMM E-Value=2.1e-07) 27 6.9
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061) 27 9.2
SB_51805| Best HMM Match : DUF755 (HMM E-Value=6.8) 27 9.2
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 27 9.2
SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_48563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 164 YLTCEYHVKVSPLKI--FNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFK 313
YL E++ K S K F+K+ KG K+P+Q+N DCG++LLQYVE FF+
Sbjct: 2 YLMHEWNHKKSEGKKRDFSKETFKGGFPKVPEQDNHCDCGVFLLQYVESFFE 53
>SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 11 DDDEHDKSPLENKMEPQQCCSKNEPIKQPCILIFDSLAGASRSRVVATLRDYLTCEYHVK 190
DD D+ L+ + Q+C + N P + S G SRSR+ Y + ++K
Sbjct: 129 DDLMSDRDMLKLMKQVQRCYAVNRRADHPVQMYLTSFEGKSRSRLDHIGCHYDRWDVNIK 188
Query: 191 VSPL-KIFNKDNI 226
L K+F K++I
Sbjct: 189 SEHLTKVFPKEDI 201
>SB_47643| Best HMM Match : Peptidase_C48 (HMM E-Value=1.5e-05)
Length = 504
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 89 KQPCILIFDSLAGASRSRVVATLRDYLTCEYHV-KVSPLKIFNKDNIKGSCLKIPQQNNF 265
K+ I DSLAG S + T + +HV K + + N G +PQ+ N
Sbjct: 202 KEKSIFALDSLAG---SFIKPTAEAAMCKMWHVLKKADSSLDIASNKPGD---LPQKANG 255
Query: 266 TDCGLYLLQY 295
DCG++LL Y
Sbjct: 256 IDCGVFLLMY 265
>SB_44896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 80 HFYYNTVEVPFC-SPADFYHVHHHQNH 3
H++++ V+ P+C SP D ++ H +H
Sbjct: 31 HYFHSPVDQPYCHSPVDHHYFHSPMDH 57
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 80 HFYYNTVEVPFC-SPADFYHVHHHQNH 3
H++++ V+ P+C SP D ++ H +H
Sbjct: 58 HYFHSPVDQPYCHSPVDHHYFHSTMDH 84
>SB_6866| Best HMM Match : Peptidase_C48 (HMM E-Value=0.045)
Length = 1050
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 212 NKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFK 313
N NI + + + QQ T+CGL+ + Y+ K
Sbjct: 237 NSPNISINVIPVQQQTKPTECGLFAVAYMTSILK 270
>SB_41291| Best HMM Match : Piwi (HMM E-Value=0)
Length = 598
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -1
Query: 342 IGSV*SVIGSL-KNCSTYCSRYRPQS 268
I S+ +V+ SL +N S YC+R RPQ+
Sbjct: 273 IPSIAAVVASLDRNASRYCARVRPQT 298
>SB_57117| Best HMM Match : Peptidase_C48 (HMM E-Value=8.4e-05)
Length = 524
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 245 IPQQNNFTDCGLYLLQY 295
+PQQ N DCG++LL Y
Sbjct: 485 LPQQANGIDCGVFLLMY 501
>SB_51235| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00046)
Length = 534
Score = 27.9 bits (59), Expect = 5.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 83 PIKQPCILIFDSLAG--ASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQ 256
P+K I+ DSLAG A S + A + L + + P + N S IPQQ
Sbjct: 369 PLKHT-IIALDSLAGYKAKPSAISAVHKWSLLTTNNDALDPQQWKFCSN---SPQDIPQQ 424
Query: 257 NNFTDCGLYLLQYVEQFFKD 316
N DCG+++ Y D
Sbjct: 425 GNSYDCGVFVCMYARSLVYD 444
>SB_5912| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-08)
Length = 337
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 27 IKVRWRTKWNLNSVVVKMNQSNNP 98
+ W+ WN+ + V+ +N S NP
Sbjct: 254 VSPEWKLAWNITTTVIYINSSMNP 277
>SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 5 DSDDDEHDKSPLENKMEPQQCCSKNEPIKQP 97
D+DDD+ D +N + + SKN P K P
Sbjct: 151 DNDDDDDDDDDDDNNNKKKASASKNLPPKAP 181
>SB_18764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 11 DDDEHDKSPLENKMEPQQCCSKNEPIKQPCILIFDSLAGASRSRVVAT 154
+DD +S +E+ E +C + N P+ + C++ +++ S +V T
Sbjct: 145 EDDIDTESEVEDSWECDKCKTMNHPMTRRCVVCWENREDEVCSTLVRT 192
>SB_18047| Best HMM Match : Pkinase (HMM E-Value=2.1e-07)
Length = 179
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 272 CGLYLLQYVEQF--FKDPITDYTLPIKQ 349
CGL L + + +F DP+ DY LP +Q
Sbjct: 120 CGLVLWELLSRFSVHDDPVEDYRLPFEQ 147
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 198 LSKYSIRTISKGVALKYLSKTILQIVAYIYYSMLSSFSRI 317
L ++ RT GV +YL LQ+ +Y Y + + RI
Sbjct: 3187 LHRHGYRTYVVGVGDRYLQPETLQVASYADYIYYNDYPRI 3226
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 24 MIKVRWRTKWNLNSVVVKMNQSNN 95
MIK W T W +N V+ + NN
Sbjct: 823 MIKNSWSTHWGMNGYVLMSQKDNN 846
>SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061)
Length = 410
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 272 CGLYLLQYVEQFFKDPITDYTLPIKQLTNWFDEIVV--TRKREEIS 403
CG Q++ +KD DY +K T F+++ + TRK EE+S
Sbjct: 143 CGSLKHQFLHIRYKDEDGDYVNLMKDDTENFNDMFIRATRKGEEVS 188
>SB_51805| Best HMM Match : DUF755 (HMM E-Value=6.8)
Length = 369
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 198 LSKYSIRTISKGVA-LKYLSKTILQIVAYIYYSMLSSFSRIL 320
++K + +++K A + SKT L++ AYIY++ L S +R L
Sbjct: 73 IAKDRLTSVTKAHANAQPTSKTFLKVQAYIYFTALLSCNRKL 114
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 296 VEQFFKDPITDYTLPIKQLTNWFDEIVVTRKREEISNLLKSLMNKYNPDSH 448
V ++ D TL + + T+W E VT E S L ++PD H
Sbjct: 142 VGKYLASQSDDKTLRVWRTTDWQQETSVTEPFLECSGTTHVLRLSWSPDGH 192
>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 917
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 5 DSDDDEHDKSPLENKMEPQQCCSKNEPIKQP 97
D DDD+ ++S E+ Q S++EP++QP
Sbjct: 583 DDDDDDDEESETEDSQTTLQD-SRDEPLEQP 612
>SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1288
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 2 CDSDDDEHDKSPLENKMEPQQCCSKNE 82
CD DDD HD S N CS+NE
Sbjct: 646 CDKDDDCHDGSDERNSC-ATMTCSENE 671
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,132,118
Number of Sequences: 59808
Number of extensions: 261237
Number of successful extensions: 874
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -