Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32132
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.3  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   7.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   7.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   7.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.5  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   10.0 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   10.0 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   10.0 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   10.0 

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 5   DSDDDEHDKSPLENKME-PQQCCSKNE 82
           D DDDE D   ++++ E P    S +E
Sbjct: 87  DKDDDESDNENIKSQKEFPNSSSSDDE 113


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/51 (21%), Positives = 22/51 (43%)
 Frame = +2

Query: 263 FTDCGLYLLQYVEQFFKDPITDYTLPIKQLTNWFDEIVVTRKREEISNLLK 415
           F+  G Y L  +   +KD    Y    K+   W   ++    R++I  +++
Sbjct: 68  FSCIGYYKLNKIHDAYKDLNQRYGALCKEEALWNFPMISVFSRQDIETIIR 118


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 217 LIEYFERRYFNMVFTSKIV 161
           + EYFE RY    F  +++
Sbjct: 412 ITEYFEHRYQGKFFDEELI 430


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 217 LIEYFERRYFNMVFTSKIV 161
           + EYFE RY    F  +++
Sbjct: 380 ITEYFEHRYQGKFFDEELI 398


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 383 RKREEISNLLKSLMNKYNPDSHLTLPDITFPTLNGKLIES 502
           RK   +  L + +     PDS +  P+ T P+L   L ++
Sbjct: 646 RKMPSMPLLPRPISCHTTPDSFIEAPNKTLPSLPSTLTKN 685


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 11  DDDEHDKSPLENKMEPQQCC 70
           D ++H  SPLE    P + C
Sbjct: 687 DWEDHASSPLEPSAVPSKFC 706


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 392 EEISNLLKSLMNKYNPD 442
           E    L  SL NKY+PD
Sbjct: 96  ENKPELWDSLANKYDPD 112


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 392 EEISNLLKSLMNKYNPD 442
           E    L  SL NKY+PD
Sbjct: 96  ENKPELWDSLANKYDPD 112


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 392 EEISNLLKSLMNKYNPD 442
           E    L  SL NKY+PD
Sbjct: 96  ENKPELWDSLANKYDPD 112


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 8   SDDDEHDKSPLENKMEPQQC 67
           S DDE  ++ L    +P QC
Sbjct: 549 SGDDELHRASLSKTPQPPQC 568


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,341
Number of Sequences: 438
Number of extensions: 2834
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)