Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32128
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 299 GKLDALIQFWVIFGYSCSENKTREFFVLLYLIQFIN 406
           G LD+LI   V+        KT+E+  L    Q+I+
Sbjct: 81  GSLDSLILLMVLVSIILGSLKTKEWAKLNNKFQYID 116


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 167  AFSIQPHLLYLVWYPHSVTLGEGR 238
            A ++  +L Y  W   + T+GEG+
Sbjct: 1269 AKNLDSNLKYEFWVTAATTIGEGQ 1292


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +2

Query: 254 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 391
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 14  PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 59



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 433 EELLNAIKSIYKLD 392
           EE++  +KS+++LD
Sbjct: 314 EEMMEFLKSVFRLD 327


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +2

Query: 254 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 391
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 247 PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 292



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 433 EELLNAIKSIYKLD 392
           EE++  +KS+++LD
Sbjct: 547 EEMMEFLKSVFRLD 560


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +2

Query: 254 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 391
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 247 PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 292



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 433 EELLNAIKSIYKLD 392
           EE++  +KS+++LD
Sbjct: 547 EEMMEFLKSVFRLD 560


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -1

Query: 162 NQPKLQSWS*VDRASAPKGGRAALPAAPEIIQNQTRWGERRSPLSVNNA 16
           +QP  + +S  D+      GR A   +PE  +   R  E   P + N A
Sbjct: 277 HQPSSEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPA 325


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -1

Query: 162 NQPKLQSWS*VDRASAPKGGRAALPAAPEIIQNQTRWGERRSPLSVNNA 16
           +QP  + +S  D+      GR A   +PE  +   R  E   P + N A
Sbjct: 277 HQPSSEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPA 325


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 201 YGTHTLSHWARAALTPRLRFL 263
           YG H +++     LTP+L ++
Sbjct: 448 YGFHNVTNTTLQNLTPQLNYI 468


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 428 FFTGIQMVHHYLMPS*ILVL 487
           FFT   +VH YL    +L+L
Sbjct: 529 FFTVFNVVHCYLASELVLML 548


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,449
Number of Sequences: 336
Number of extensions: 3170
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)