Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32128
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.       30   1.6  
AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-P...    30   1.6  

>AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.
          Length = 3479

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = -3

Query: 343  ISKNYPKLNQSIQLSTWSCLPYS*CIYKNRRRGVRAALAQCDRVWVPYEVEQMRLDAECD 164
            +SK   +L   + +S +S + +    +++ R  VRA L QC   W    ++ M L A   
Sbjct: 1646 LSKQLAQLRPELTMSIFSEITHR---FQSAREDVRALLLQCLLPW----LQNMELVATSV 1698

Query: 163  QPAETSELVMS*PCFSTQ-RRKGCSSRSA 80
             PA     +M  P   T+ RR+G  S  A
Sbjct: 1699 PPATPLSYIMYFPDSGTRGRREGTGSTEA 1727


>AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-PB,
            isoform B protein.
          Length = 3479

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = -3

Query: 343  ISKNYPKLNQSIQLSTWSCLPYS*CIYKNRRRGVRAALAQCDRVWVPYEVEQMRLDAECD 164
            +SK   +L   + +S +S + +    +++ R  VRA L QC   W    ++ M L A   
Sbjct: 1646 LSKQLAQLRPELTMSIFSEITHR---FQSAREDVRALLLQCLLPW----LQNMELVATSV 1698

Query: 163  QPAETSELVMS*PCFSTQ-RRKGCSSRSA 80
             PA     +M  P   T+ RR+G  S  A
Sbjct: 1699 PPATPLSYIMYFPDSGTRGRREGTGSTEA 1727


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,556,096
Number of Sequences: 53049
Number of extensions: 562331
Number of successful extensions: 1210
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)