BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32125
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 67 4e-12
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 67 4e-12
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 67 4e-12
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 67 4e-12
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 66 7e-12
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 66 7e-12
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 42 1e-04
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 42 1e-04
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 37 0.005
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 37 0.005
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 36 0.007
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 36 0.007
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 36 0.007
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 36 0.009
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 33 0.083
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 33 0.083
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 29 1.0
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 29 1.0
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 29 1.0
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 29 1.0
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 29 1.0
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 27 4.1
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 26 7.2
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 26 7.2
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 26 7.2
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 26 9.5
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/74 (41%), Positives = 48/74 (64%)
Frame = +1
Query: 145 QSSRGSRKAKRTGSNVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLAS 324
++++ KR+GS + F QK + EF EAF +MD KDGII +DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 325 XKELDEMVGEASGP 366
++D M+ EASGP
Sbjct: 62 DSQIDAMIKEASGP 75
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/74 (41%), Positives = 48/74 (64%)
Frame = +1
Query: 145 QSSRGSRKAKRTGSNVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLAS 324
++++ KR+GS + F QK + EF EAF +MD KDGII +DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 325 XKELDEMVGEASGP 366
++D M+ EASGP
Sbjct: 62 DSQIDAMIKEASGP 75
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/74 (41%), Positives = 48/74 (64%)
Frame = +1
Query: 145 QSSRGSRKAKRTGSNVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLAS 324
++++ KR+GS + F QK + EF EAF +MD KDGII +DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 325 XKELDEMVGEASGP 366
++D M+ EASGP
Sbjct: 62 DSQIDAMIKEASGP 75
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/74 (41%), Positives = 48/74 (64%)
Frame = +1
Query: 145 QSSRGSRKAKRTGSNVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLAS 324
++++ KR+GS + F QK + EF EAF +MD KDGII +DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 325 XKELDEMVGEASGP 366
++D M+ EASGP
Sbjct: 62 DSQIDAMIKEASGP 75
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 66.1 bits (154), Expect = 7e-12
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +1
Query: 142 RQSSRGSRKAKRTGSNVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLA 321
R++ ++ +R SNVF+MF Q Q+ EF EAF ++D +DG I DL+ F SLG+
Sbjct: 4 RKTVNRRQRPQRATSNVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEV 63
Query: 322 SXKELDEMVGEASG 363
+ + +D M+ EA G
Sbjct: 64 TEQFIDSMINEAPG 77
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 235 AFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGEA 357
AFQ D G + LR ++G S +++DE+ +A
Sbjct: 106 AFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDA 146
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 66.1 bits (154), Expect = 7e-12
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +1
Query: 142 RQSSRGSRKAKRTGSNVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLA 321
R++ ++ +R SNVF+MF Q Q+ EF EAF ++D +DG I DL+ F SLG+
Sbjct: 4 RKTVNRRQRPQRATSNVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEV 63
Query: 322 SXKELDEMVGEASG 363
+ + +D M+ EA G
Sbjct: 64 TEQFIDSMINEAPG 77
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 235 AFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGEA 357
AFQ D G + LR ++G S +++DE+ +A
Sbjct: 106 AFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDA 146
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 42.3 bits (95), Expect = 1e-04
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 205 SQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
+++Q+AEF EAF L D DG I +L SLG+ + EL +M+ E
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 55
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 223 EFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGEA 357
E EAF++ D +G I +LR +LG + +E+DEM+ EA
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 42.3 bits (95), Expect = 1e-04
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 205 SQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
+++Q+AEF EAF L D DG I +L SLG+ + EL +M+ E
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 55
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 223 EFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGEA 357
E EAF++ D +G I +LR +LG + +E+DEM+ EA
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 148 SSRGSRKAKRTGSNVFSM-FSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLAS 324
SSRG+ ++++ M +++K++ E+ + F + D G IG +L+ S+G A+
Sbjct: 26 SSRGTIHSQQSQPEDIQMKYTRKELKEYRQLFNMFDTDGSGAIGNEELKQAMISIGLHAN 85
Query: 325 XKELDEMVGE 354
E+D ++ E
Sbjct: 86 KAEIDNVIKE 95
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 223 EFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
E EAF+L D +G I +DLR +L S +ELDEM+ E
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAE 139
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 223 EFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
E EAF+L D +G I +DLR +L S +ELDEM+ E
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAE 139
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 187 NVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
++ + +++ EF EAF + D +G I +L SLG+ + +E+ EM+ E
Sbjct: 70 DIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINE 125
Score = 29.9 bits (64), Expect = 0.58
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 232 EAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
EAF++ D +G+I + R +G S +E+DEM+ E
Sbjct: 157 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKE 197
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 187 NVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
++ + +++ EF EAF + D +G I +L SLG+ + +E+ EM+ E
Sbjct: 13 DIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINE 68
Score = 29.9 bits (64), Expect = 0.58
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 232 EAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
EAF++ D +G+I + R +G S +E+DEM+ E
Sbjct: 100 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKE 140
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 223 EFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGEA 357
E EAF++ D +G I +LR +LG + +E+DEM+ EA
Sbjct: 34 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 78
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 35.9 bits (79), Expect = 0.009
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 193 FSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMV 348
FS FS+KQ+ F F+ D +D I N+L+ + LG + L E++
Sbjct: 535 FSEFSRKQIQYFSGIFKKYDEDQDSYIDFNELKRMMEKLGEAQTHIALKELI 586
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 32.7 bits (71), Expect = 0.083
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 163 RKAKRTG-SNVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELD 339
+ AK+T SNV +++++ E FQ +D + G I NDLR F + + L
Sbjct: 607 QNAKQTAVSNVALNLTKEEMQRAKERFQQLDKDRKGHITVNDLRKHFREHNQKIDERVLH 666
Query: 340 EMVGE 354
E++ E
Sbjct: 667 ELLNE 671
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 32.7 bits (71), Expect = 0.083
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 163 RKAKRTG-SNVFSMFSQKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELD 339
+ AK+T SNV +++++ E FQ +D + G I NDLR F + + L
Sbjct: 607 QNAKQTAVSNVALNLTKEEMQRAKERFQQLDKDRKGHITVNDLRKHFREHNQKIDERVLH 666
Query: 340 EMVGE 354
E++ E
Sbjct: 667 ELLNE 671
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 232 EAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
EAF++ D +G I ++ R +G S +E+DE++ E
Sbjct: 111 EAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAE 151
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 232 EAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
EAF++ D +G+I N+ + ++G E++EM+ E
Sbjct: 105 EAFKIFDRDGNGVITANEFKLFMINMGMCFDEVEVEEMMNE 145
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 223 EFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
+ E F L+D KDG + N++ A ++ + ELD + GE
Sbjct: 23 QLSETFDLLDVDKDGRLSRNEIAALLRTINVEPTRVELDFIFGE 66
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 211 KQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMV 348
K+ E + F + D DG+I +DL LG + E EM+
Sbjct: 77 KEERELRDVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMI 122
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 232 EAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
EAF++ D +G I ++ R +G S +E+DE++ E
Sbjct: 111 EAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAE 151
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 211 KQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGEA 357
K E + FQ +D DG I +L+A +L + +E+D+ + A
Sbjct: 276 KTEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIRSA 324
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 238 FQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEM 345
F+ D DG I +LRA +G+ + ELD M
Sbjct: 27 FREFDLNGDGYIQREELRAVMQKMGQSPTEDELDAM 62
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 208 QKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMV 348
Q A+F E ++ D + G I +LR +LG S E DE++
Sbjct: 79 QGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELL 125
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 208 QKQVAEFXEAFQLMDHXKDGIIGXNDLRATFDSLGRLASXKELDEMV 348
Q A+F E ++ D + G I +LR +LG S E DE++
Sbjct: 79 QGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELL 125
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 250 DHXKDGIIGXNDLRATFDSLGRLASXKELDEMVGE 354
D KD + G + L+ FD++G KE D VGE
Sbjct: 954 DLGKDILDGLHLLKGVFDNMGDKGFLKEEDISVGE 988
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.131 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,516,704
Number of Sequences: 27780
Number of extensions: 65694
Number of successful extensions: 196
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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