Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32122
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) / po... 53 1e-07
At5g37500.1 68418.m04516 guard cell outward rectifying K+ channe... 48 3e-06
At2g26650.1 68415.m03197 potassium channel protein 1 (AKT1) iden... 42 2e-04
At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel... 37 0.007
At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel... 35 0.037
At4g22200.1 68417.m03209 potassium channel protein 2 (AKT2) (AKT... 35 0.037
At4g32650.2 68417.m04648 inward rectifying potassium channel, pu... 34 0.049
At4g32650.1 68417.m04647 inward rectifying potassium channel, pu... 34 0.049
At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel... 33 0.15
At2g28260.1 68415.m03430 cyclic nucleotide-regulated ion channel... 32 0.20
At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes f... 32 0.26
At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel... 31 0.46
At2g40475.1 68415.m04995 expressed protein 31 0.46
At1g01710.1 68414.m00089 acyl-CoA thioesterase family protein co... 31 0.46
At1g19780.1 68414.m02473 cyclic nucleotide-regulated ion channel... 31 0.61
At1g15990.1 68414.m01918 cyclic nucleotide-regulated ion channel... 31 0.61
At1g01340.1 68414.m00049 cyclic nucleotide-regulated ion channel... 30 0.80
At2g28690.1 68415.m03487 expressed protein 30 1.1
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 29 1.4
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 29 1.9
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 29 1.9
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 29 1.9
At4g00510.1 68417.m00070 cyclic nucleotide-binding domain-contai... 29 1.9
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 29 1.9
At1g77460.1 68414.m09020 C2 domain-containing protein / armadill... 29 1.9
At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel... 29 2.5
At2g19440.1 68415.m02269 glycosyl hydrolase family 17 protein si... 28 3.2
At5g40590.1 68418.m04926 DC1 domain-containing protein predicted... 28 4.3
At4g33480.1 68417.m04755 expressed protein 27 5.7
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 5.7
At1g51915.1 68414.m05852 cryptdin protein-related contains weak ... 27 5.7
At1g08400.1 68414.m00929 chromosome structural maintenance prote... 27 5.7
At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein si... 27 7.5
At2g17740.1 68415.m02055 DC1 domain-containing protein 27 7.5
At1g64760.1 68414.m07343 glycosyl hydrolase family 17 protein si... 27 7.5
At4g29050.1 68417.m04155 lectin protein kinase family protein co... 27 9.9
At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein si... 27 9.9
At2g45480.1 68415.m05656 expressed protein 27 9.9
At1g44120.1 68414.m05096 C2 domain-containing protein / armadill... 27 9.9
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 27 9.9
>At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) /
potassium channel protein identical to SKOR [Arabidopsis
thaliana] gi|3810676|emb|CAA11280; member of the 1 pore,
6 transmembrane (1P/6TM) Shaker K+ channel family,
PMID:11500563
Length = 828
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/90 (27%), Positives = 50/90 (55%)
Frame = +2
Query: 233 VRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 412
+ + LFR ++ + Q++ + E+ PGE ++ QG D Y + +GV + + D
Sbjct: 398 IEKVPLFRGCSSEFINQIVIRLHEEFFLPGEVIMEQGSVVDQLYFVCHGVLEEIGITKDG 457
Query: 413 VEKVVHTYEGSGSFGELALMYNMPRAASVR 502
E++V + SFGE++++ N+P+ +VR
Sbjct: 458 SEEIVAVLQPDHSFGEISILCNIPQPYTVR 487
>At5g37500.1 68418.m04516 guard cell outward rectifying K+ channel
(GORK) identical to guard cell outward rectifying K+
channel [Arabidopsis thaliana] gi|11414742|emb|CAC17380;
member of the 1 pore, 6 transmembrane (1P/6TM) Shaker K+
channel family, PMID:11500563
Length = 820
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/90 (26%), Positives = 49/90 (54%)
Frame = +2
Query: 233 VRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 412
++ + LF+ + + Q++ + E+ PGE + QG+ D+ Y + G+ + LVT D
Sbjct: 381 IKKVPLFKGCSTEFINQIVIRLHEEYFLPGEVITEQGNVVDHLYFVCEGLLEALVTKTDG 440
Query: 413 VEKVVHTYEGSGSFGELALMYNMPRAASVR 502
E+ V SFG+++++ N+ + +VR
Sbjct: 441 SEESVTLLGPHTSFGDISIICNISQPFTVR 470
>At2g26650.1 68415.m03197 potassium channel protein 1 (AKT1)
identical to AKT1 [Arabidopsis thaliana]
gi|563112|gb|AAA96810; member of the 1 pore, 6
transmembrane (1P/6TM- Shaker-type) K+ channel family,
PMID:11500563
Length = 857
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +2
Query: 242 ILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEK 421
+ LFR + + Q++ M + P E VI Q + +FY++ NG D LV D E
Sbjct: 370 VYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVNGTAD-LVDVDTGTES 428
Query: 422 VVHTYEGSGSFGELALMYNMPRAASVRAQ 508
+V + GE+ ++ P+ +VR +
Sbjct: 429 IVREVKAGDIIGEIGVLCYRPQLFTVRTK 457
>At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel,
putative (CNGC14) similar to cyclic nucleotide and
calmodulin-regulated ion channel (GI:4581205)
[Arabidopsis thaliana]
Length = 726
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 197 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIEN 376
+ D QR + VR + LF +D Q + + + + S G Y++R+GD I
Sbjct: 464 RRDIQRHLCLDLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIR 523
Query: 377 GVFDVLVTGDDR 412
G + T R
Sbjct: 524 GKLESSTTNGGR 535
>At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC1) almost identical
to cyclic nucleotide-regulated ion channel 1 pir:T51354,
GI:11357236 from [Arabidopsis thaliana]
Length = 716
Score = 34.7 bits (76), Expect = 0.037
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +2
Query: 140 ETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEP 319
ET +E++ P + + LA +R + +F +D Q + + D +
Sbjct: 451 ETRGVDEENLLSNLPKDLRRDIKRHLCLALLMR-VPMFEKMDEQLLDALCDRLQPVLYTE 509
Query: 320 GEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSF-GELALMYNM-PRAA 493
Y++R+GD D I G + T R + Y G+G F GE L + + P ++
Sbjct: 510 ESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSS 569
Query: 494 S 496
S
Sbjct: 570 S 570
>At4g22200.1 68417.m03209 potassium channel protein 2 (AKT2) (AKT3)
identical to potassium channel [Arabidopsis thaliana]
gi|1100898|gb|AAA97865; Note: also identical to AKT3
[Arabidopsis thaliana] gi|1172218|gb|AAA96153, which is
a truncated version of AKT2, PMID:10852932; member of
the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+
channel family, PMID:11500563; identical to cDNA
inward-rectifying K+ channel (AKT3) GI:1172219
Length = 802
Score = 34.7 bits (76), Expect = 0.037
Identities = 21/94 (22%), Positives = 48/94 (51%)
Frame = +2
Query: 230 AVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDD 409
+V + LF+ + + + ++ M + P E VI Q + D+ Y+I +G +++ + +
Sbjct: 388 SVEKVYLFKGVSREILLLLVSKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEIIDSEME 447
Query: 410 RVEKVVHTYEGSGSFGELALMYNMPRAASVRAQT 511
R E V+ T FGE+ + P++ + + ++
Sbjct: 448 R-ESVLGTLRCGDIFGEVGALCCRPQSYTFQTKS 480
>At4g32650.2 68417.m04648 inward rectifying potassium channel,
putative (KAT3) (AKT4) (KC1) identical to K+ inward
rectifying channel protein KC1 [Arabidopsis thaliana]
gi|4090537|gb|AAC98810; similar to (KAT1) K+ channel
[Arabidopsis thaliana] gi|1165000|emb|CAA63601;
Shaker-type channel (1P/6TM), PMID:11500563
Length = 597
Score = 34.3 bits (75), Expect = 0.049
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVV 427
LF+ + Q++ + + P +I Q + +FYVI +G D++ + V + V
Sbjct: 406 LFKGFPEGLLVQLVSQIQAEYFPPKMEIILQNEIPTDFYVIVSGGVDIIAS--KGVSEQV 463
Query: 428 HTYEGSGSF-GELALMYNMPRAASVRAQ 508
G GS GE+ +++N+P+ +VR +
Sbjct: 464 LAKLGPGSMAGEIGVVFNIPQPFTVRTR 491
>At4g32650.1 68417.m04647 inward rectifying potassium channel,
putative (KAT3) (AKT4) (KC1) identical to K+ inward
rectifying channel protein KC1 [Arabidopsis thaliana]
gi|4090537|gb|AAC98810; similar to (KAT1) K+ channel
[Arabidopsis thaliana] gi|1165000|emb|CAA63601;
Shaker-type channel (1P/6TM), PMID:11500563
Length = 662
Score = 34.3 bits (75), Expect = 0.049
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 LFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVV 427
LF+ + Q++ + + P +I Q + +FYVI +G D++ + V + V
Sbjct: 406 LFKGFPEGLLVQLVSQIQAEYFPPKMEIILQNEIPTDFYVIVSGGVDIIAS--KGVSEQV 463
Query: 428 HTYEGSGSF-GELALMYNMPRAASVRAQ 508
G GS GE+ +++N+P+ +VR +
Sbjct: 464 LAKLGPGSMAGEIGVVFNIPQPFTVRTR 491
>At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel,
putative (CNGC18) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 706
Score = 32.7 bits (71), Expect = 0.15
Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 EVYKIVRLEDEEYFVKK--PPVARFNNRR--KSVFAETYDPEEDDSDEGAPAVFPKSDAQ 211
E +++ R + EE+ + PP + RR + + T +E+ P + + Q
Sbjct: 378 EEWRVKRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEESILHSLPTDL-RREIQ 436
Query: 212 RARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDV 391
R VR + F +D Q + + + S G Y+ R+GD + + G +
Sbjct: 437 RHLCLSLVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIES 496
Query: 392 LVTGDDR 412
T R
Sbjct: 497 STTNGGR 503
>At2g28260.1 68415.m03430 cyclic nucleotide-regulated ion channel,
putative (CNGC15) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 678
Score = 32.3 bits (70), Expect = 0.20
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 197 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIEN 376
+ D +R + VR + LF +D + + + + + G +++R+GD + I
Sbjct: 454 RRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIR 513
Query: 377 GVFDVLVTGDDRVEKVVHTYEGSGSF-GELALMYNM-PR 487
G D T R G G F GE L + + PR
Sbjct: 514 GHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPR 552
>At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes from
this gene
Length = 673
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -3
Query: 304 FEHRIQNLLHLLRV-KRTEQQYAPDRLSETGSLCVR 200
FEH++++ LH+ R K+ +QQ D+L E +C R
Sbjct: 607 FEHQLESSLHIARAHKQEQQQQQTDKLKENLMVCQR 642
>At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel,
putative (CNGC17) similar to cyclic nucleotide and
calmodulin-regulated ion channel cngc5 GI:4581205 from
[Arabidopsis thaliana]
Length = 720
Score = 31.1 bits (67), Expect = 0.46
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 197 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGD 346
+ D QR + VR + F +D Q + + + + G Y++R+GD
Sbjct: 464 RRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGD 513
>At2g40475.1 68415.m04995 expressed protein
Length = 193
Score = 31.1 bits (67), Expect = 0.46
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -1
Query: 441 PSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGSDLFSNIASRTCCICCAS 262
PS+ W++ S+ SS +S P + + C +Y D ++S C
Sbjct: 104 PSFSWSSASSSSSSSYSSSSPPSKVEHRPRKCYSCSRSYVKEDDEEEIVSSSPTSTLCYK 163
Query: 261 RERNSSMPRTASARRALCA 205
R +SSM S +RALC+
Sbjct: 164 RGFSSSM---GSMKRALCS 179
>At1g01710.1 68414.m00089 acyl-CoA thioesterase family protein
contains Pfam profiles: PF02551 acyl-CoA thioesterase,
PF00027 cyclic nucleotide-binding domain
Length = 427
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2
Query: 221 LAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVT 400
+ E + + L + L + ++++ + KR G+YV+R+ D Y I G + V+
Sbjct: 6 VVEFLGNVPLLQKLPSSSLKKIAQVVVPKRYGKGDYVVREDQTWDGCYFILQG--EAQVS 63
Query: 401 GDD 409
G D
Sbjct: 64 GPD 66
>At1g19780.1 68414.m02473 cyclic nucleotide-regulated ion channel,
putative (CNGC8) similar to cyclic nucleotide and
calmodulin-regulated ion channel GI:4581207 from
(Arabidopsis thaliana)
Length = 728
Score = 30.7 bits (66), Expect = 0.61
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 EVYKIVRLEDEEYFVKK--PPVARFNNRRKSVFA--ETYDPEEDDSDEGAPAVFPKSDAQ 211
E +I R + E++ + P R RR + ET +E++ + P + D +
Sbjct: 412 EEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDL-RRDIK 470
Query: 212 RARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDV 391
R VR + LF ++D + + + + + Y++R+GD + I G +
Sbjct: 471 RHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLES 530
Query: 392 LVTGDDR 412
+ T R
Sbjct: 531 VTTDGGR 537
>At1g15990.1 68414.m01918 cyclic nucleotide-regulated ion channel,
putative (CNGC7) similar to cyclic nucleotide and
calmodulin-regulated ion channel protein GI:4581207 from
[Arabidopsis thaliana]
Length = 709
Score = 30.7 bits (66), Expect = 0.61
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 EVYKIVRLEDEEYFVKK--PPVARFNNRRKSVFA--ETYDPEEDDSDEGAPAVFPKSDAQ 211
E +I R + E++ + P R RR + ET +E++ + P + D +
Sbjct: 402 EEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDL-RRDIK 460
Query: 212 RARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDV 391
R VR + LF ++D + + + + + Y++R+GD + I G +
Sbjct: 461 RHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLES 520
Query: 392 LVTGDDR 412
+ T R
Sbjct: 521 VTTDGGR 527
>At1g01340.1 68414.m00049 cyclic nucleotide-regulated ion channel
(CNGC10) (ACBK1) almost identical to CaM-regulated
potassium ion channel (ACBK1) GI:8515883 from
[Arabidopsis thaliana]; contains Pfam domain, PF00520:
Ion transport protein
Length = 706
Score = 30.3 bits (65), Expect = 0.80
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 140 ETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEP 319
ET EE+ P + D +R + ++ + LF +D Q + V D +
Sbjct: 433 ETRGVEEETLLRNLPKDL-RRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTE 491
Query: 320 GEYVIRQGDD-GDNFYVIENGVFDVLVTG 403
YVIR+GD G+ +V+ + G
Sbjct: 492 NSYVIREGDPVGEMLFVMRGRLVSATTNG 520
>At2g28690.1 68415.m03487 expressed protein
Length = 231
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 307 LFEHRIQNLLHLLRVKRTEQQYAPDRLSE 221
L + ++NLLHLL++ R E+ A D+L +
Sbjct: 41 LHQEEVKNLLHLLKLARQERDEAKDQLQK 69
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 182 PAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPG--EYVIRQGDDGD 355
PA F + Q + A A+ G+ + R ++ + + +K E Y + G
Sbjct: 193 PAYFNDAQRQATKDAGAIAGLNVVRIINEPTGAAIAYGLDKKGGESNILVYDLGGGTFDV 252
Query: 356 NFYVIENGVFDVLVTGDD 409
+ I+NGVF+VL T D
Sbjct: 253 SILTIDNGVFEVLSTSGD 270
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 29.1 bits (62), Expect = 1.9
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +2
Query: 50 YKIVRLEDEEYFVKKPP-VARFNNRRKSVFAETYDPEE-DDSDEGAPAVFPKSDAQRARL 223
Y V+++D E V P ++ + AE Y ++ D+ PA F + Q +
Sbjct: 133 YIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKD 192
Query: 224 AEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYV--IENGVFDVLV 397
A + G+ + R ++ + + +K E V G + V I+NGVF+VL
Sbjct: 193 AGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLS 252
Query: 398 TGDD 409
T D
Sbjct: 253 TNGD 256
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 29.1 bits (62), Expect = 1.9
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +2
Query: 50 YKIVRLEDEEYFVKKPP-VARFNNRRKSVFAETYDPEE-DDSDEGAPAVFPKSDAQRARL 223
Y V+++D E V P ++ + AE Y ++ D+ PA F + Q +
Sbjct: 133 YIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKD 192
Query: 224 AEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYV--IENGVFDVLV 397
A + G+ + R ++ + + +K E V G + V I+NGVF+VL
Sbjct: 193 AGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLS 252
Query: 398 TGDD 409
T D
Sbjct: 253 TNGD 256
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 29.1 bits (62), Expect = 1.9
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +2
Query: 50 YKIVRLEDEEYFVKKPP-VARFNNRRKSVFAETYDPEE-DDSDEGAPAVFPKSDAQRARL 223
Y V+++D E V P ++ + AE Y ++ D+ PA F + Q +
Sbjct: 133 YIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKD 192
Query: 224 AEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYV--IENGVFDVLV 397
A + G+ + R ++ + + +K E V G + V I+NGVF+VL
Sbjct: 193 AGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLS 252
Query: 398 TGDD 409
T D
Sbjct: 253 TNGD 256
>At4g00510.1 68417.m00070 cyclic nucleotide-binding
domain-containing protein contains Pfam profile: PF00027
cyclic nucleotide-binding domain
Length = 175
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +2
Query: 221 LAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLV- 397
+ E + + L + L + ++++ + + K + G+YV+R+ + D Y + G V
Sbjct: 6 VVEFLGNVTLLQRLPSSSLKRISEVVVFKGYDRGDYVVRENQNVDGVYFLLQGQVRAQVL 65
Query: 398 --TGDDRVEKVV---HTYEGSGSFGEL 463
G++ ++ + + G G FG++
Sbjct: 66 RSAGEENYQEFPLKRYDFFGHGIFGDV 92
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = -1
Query: 459 SPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSP 319
SP+ P PS T ST S P K+P T K SPS P L + P
Sbjct: 76 SPSTPIPS----TPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVP 118
>At1g77460.1 68414.m09020 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2110
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 457 AKRTGTFVCVDHLFDAVVSGDQDVENAVLD 368
A TF C+ HL A+ SG +DV+ VLD
Sbjct: 1899 ASEAATF-CIPHLVGALKSGVEDVQGLVLD 1927
>At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel,
putative (CNGC16) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 705
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +2
Query: 209 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 388
QR VR + F +D Q + + + + + YVIR+GD + I G +
Sbjct: 444 QRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQME 503
Query: 389 VLVTGDDR 412
T R
Sbjct: 504 SSTTDGGR 511
>At2g19440.1 68415.m02269 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]; an isoform
contains a non-consensus GA-AG intron
Length = 478
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 211 LCVRLGEHG----RGSFVRIILFGVISLGENGFAPIVKARHWRLF 89
L RLGE+ R +++ + LFG++ AP RHW +F
Sbjct: 284 LLPRLGENRGTPLRPTYIEVYLFGLLDEDAKSIAPGEFERHWGIF 328
>At5g40590.1 68418.m04926 DC1 domain-containing protein predicted
protein, Arabidopsis thaliana
Length = 234
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -2
Query: 167 NHPLRGHKSRRKR--ICADC 114
NHPLRGHK K IC+ C
Sbjct: 13 NHPLRGHKCEAKDEIICSGC 32
>At4g33480.1 68417.m04755 expressed protein
Length = 336
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 481 HVVHQGQ-FAKRTGTFVCVDHLFDAVVSGDQDVENAVLDDVEV 356
H+VH G + R G D++FD QDVE + VE+
Sbjct: 221 HLVHSGFCYTARGGFCYTEDNVFDFRTDDGQDVEGLPTEGVEI 263
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 477 LYIRASSPNEPEPSYV-WTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGS 313
L + SSP P PS ++ S SP +S + LSPSSP ++ SP S
Sbjct: 61 LSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSS 116
>At1g51915.1 68414.m05852 cryptdin protein-related contains weak
similarity to Swiss-Prot:P17533 cryptdin-related protein
1C precursor (CRS1C) [Mus musculus]
Length = 67
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -1
Query: 357 LSPSSPCLITYSPGSDLFSNIASRTC--CICCASRERNSSMP 238
LSP PC T + D + + R C C+CCA R + P
Sbjct: 20 LSPILPCQATRAH-LDAETRMLRRVCPSCVCCAPAPRGACCP 60
>At1g08400.1 68414.m00929 chromosome structural maintenance
protein-related contains weak similarity to
RAD50-interacting protein 1 [Homo sapiens]
gi|11967435|gb|AAG42101
Length = 804
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -3
Query: 367 DVEVVAVIALSDYVLAGLGSLFEHRIQNLLHLLRVKRTEQQYAPDRLSETGSLCVRL 197
+V+ A++ + G+ F R++ +L LLR+ E+ LS +G+ C++L
Sbjct: 731 EVDAEALLTVLKPYCVRPGAFFP-RVREILRLLRMHEEEKARLRGALSRSGNTCLKL 786
>At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 488
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 211 LCVRLGEHGRGSFVRIILFGVISLGENGFAPIVKARHWRLF 89
L G R ++ + LFG I AP RHW +F
Sbjct: 295 LAANRGTPMRPGYIEVYLFGFIDEDAKSIAPGNFERHWGIF 335
>At2g17740.1 68415.m02055 DC1 domain-containing protein
Length = 248
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -2
Query: 167 NHPLRGHKSR--RKRICADC*SAPLAAFLQ 84
NHPLRGHK++ + IC+ C L A+ +
Sbjct: 13 NHPLRGHKAQVEDEIICSGCDLDLLGAYFK 42
>At1g64760.1 68414.m07343 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 481
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 184 RGSFVRIILFGVISLGENGFAPIVKARHWRLF 89
R +++ + LFG++ AP RHW +F
Sbjct: 301 RPTYIEVYLFGLLDEDAKSIAPGPFERHWGIF 332
>At4g29050.1 68417.m04155 lectin protein kinase family protein
contains Pfam domains, PF00138: Legume lectins alpha
domain, PF00139: Legume lectins beta domain and PF00069:
Protein kinase domain
Length = 669
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 111 LTIGANPFSPRLMTPKRMILTKEPLPC 191
+T G P PR +P M+LT L C
Sbjct: 538 ITCGRRPVLPRASSPSEMVLTDWVLDC 564
>At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GB:S12402 [Nicotiana sp],
GB:CAA03908 [Citrus sinensis], GB:S44364 [Lycopersicon
esculentum]
Length = 491
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 211 LCVRLGEHGRGSFVRIILFGVISLGENGFAPIVKARHWRLF 89
L +G R ++ + LFG I AP RHW +F
Sbjct: 300 LANNVGTPMRKGYIEVYLFGFIDEDAKSVAPGNFERHWGIF 340
>At2g45480.1 68415.m05656 expressed protein
Length = 429
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +3
Query: 54 KLSGWRTKNIL*KSRQWRALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTHREPVSLRR 233
K S R +I+ +SR+W+ + + F +P ++ + T EP RR
Sbjct: 254 KFSSNRKNDIIARSREWKNMNVNGGLFHGIHFSPDTVLQERGCFRLQGVETDNEPGRCRR 313
Query: 234 SGA--YCCS--VLLTRSKCSRFWMRCSKR 308
+ + CS VL + C + R K+
Sbjct: 314 TDGKKWRCSKDVLSGQKYCDKHMHRGMKK 342
>At1g44120.1 68414.m05096 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2114
Score = 26.6 bits (56), Expect = 9.9
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 433 CVDHLFDAVVSGDQDVENAVLDDV 362
C+ HL A+ SG+Q+ ++ +D +
Sbjct: 1912 CIPHLIGALKSGEQEARDSAMDTI 1935
>At1g03060.1 68414.m00280 WD-40 repeat family protein /
beige-related similar to BEIGE (GI:3928547) [Rattus
norvegicus]; Similar to gb|U70015 lysosomal trafficking
regulator from Mus musculus and contains 2 Pfam PF00400
WD-40, G-beta repeats. ESTs gb|T43386 and gb|AA395236
come from this gene
Length = 3601
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -3
Query: 448 TGTFVCVDHLFDAVVSGDQDVENAVLDDVEVVAVIALSDYVL 323
+G F C+ H+ A+++ D+ ++ + D+EVV+ + Y++
Sbjct: 188 SGIFCCLIHVLIALLAYDELSKSKITGDLEVVSAEKDAGYIV 229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,510
Number of Sequences: 28952
Number of extensions: 257622
Number of successful extensions: 943
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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