Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32115
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              24   0.50 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   2.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   2.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.6  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
 Frame = +3

Query: 54  SEEDLKAFEKLTEMCAPEN--DKPVSDS------DKGCERAKLLLDCFVANKG 188
           SEE +    K+  +CA EN  D   +D       DK  E+    +DC +   G
Sbjct: 19  SEESINKLRKIESVCAEENGIDLKKADDVKKGIFDKNDEKLACYVDCMLKKVG 71



 Score = 23.4 bits (48), Expect = 0.87
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 108 NDKPVSDSDKGCERAKLLLDCFVAN 182
           N K +++S+  C+++  LL CF+ N
Sbjct: 102 NCKDITESNS-CKKSSKLLQCFIDN 125


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 200 DRETSFVCNETVEEKFCSFAAL 135
           D+ T F     VEE  C F+A+
Sbjct: 452 DKSTEFFLATVVEEAACRFSAV 473


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +1

Query: 157 FSSTVSLQTKEVSRSSHFKEQSL*CFNNYLIISKQSFFYC 276
           F  T+  +T+ + R S    +S  C N+     + S F C
Sbjct: 339 FKQTICCKTRIIGRRSWVTRESQICNNSSSDKERNSSFKC 378


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 119 WFVIFWSAHLR 87
           WFV FW  H +
Sbjct: 425 WFVEFWEHHFQ 435


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,231
Number of Sequences: 438
Number of extensions: 1262
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)