Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32110
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...   164   3e-41
AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...    44   9e-05
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...    44   9e-05
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    35   0.040
AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily a...    30   0.85 
D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA...    29   1.5  
AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical ...    29   1.5  
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    29   2.0  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam ...    27   6.0  

>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score =  164 bits (399), Expect = 3e-41
 Identities = 77/102 (75%), Positives = 86/102 (84%)
 Frame = +3

Query: 210 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLFRGQPVLDSGSP 389
           DVQF++NLPPILN LEV  RSPRL+LEV+QHLG+N VR IAMDGTEGL RGQPV D+G P
Sbjct: 81  DVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDP 140

Query: 390 IRIPVGAETLGRXINVIGEPIDERGPIPTDKTAAIHAEAXXF 515
           I+IPVG ETLGR +NVIGEPIDERGPI +   AAIHAEA  F
Sbjct: 141 IKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEF 182


>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 20/72 (27%), Positives = 38/72 (52%)
 Frame = +3

Query: 291 VAQHLGENTVRTIAMDGTEGLFRGQPVLDSGSPIRIPVGAETLGRXINVIGEPIDERGPI 470
           +A +L  + V  +     + +  G  V  +G+ + +PVG   LGR ++ +G PID +GPI
Sbjct: 63  MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122

Query: 471 PTDKTAAIHAEA 506
              + + +  +A
Sbjct: 123 ANARRSRVEVKA 134


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 20/72 (27%), Positives = 38/72 (52%)
 Frame = +3

Query: 291 VAQHLGENTVRTIAMDGTEGLFRGQPVLDSGSPIRIPVGAETLGRXINVIGEPIDERGPI 470
           +A +L  + V  +     + +  G  V  +G+ + +PVG   LGR ++ +G PID +GPI
Sbjct: 90  MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149

Query: 471 PTDKTAAIHAEA 506
              + + +  +A
Sbjct: 150 ANARRSRVEVKA 161


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 34.7 bits (76), Expect = 0.040
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 303 LGENTVRTIAMDGTEGLFRGQPVLD-SGSPIRIPVGAETLGRXINVIGEPIDERGPI 470
           + +N       +GT G+     + + +G  +R PV  + LGR  N  G+PID+  P+
Sbjct: 71  ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPV 127


>AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 300 protein.
          Length = 501

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 378 SGSPIRIPVGAETLGRXINVIGEPIDERGPI-PTD 479
           +G   R PV  + LGR  N  G+PID+  P+ P D
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPED 143


>D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA
           thiolase protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 318 VRTIAMDGTEGLFRGQPVLDSG-SPIRIPVGAETLG-RXINVIGEPIDERGPIPTDKTAA 491
           V      G+ GLF G+ +++SG S + +  G E +    +  +  PID+R  +  DK  +
Sbjct: 83  VNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMAPGSLENLAAPIDDRA-LSVDKHIS 141

Query: 492 IHAE 503
           + +E
Sbjct: 142 VMSE 145


>AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical
           protein Y57A10C.6 protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 318 VRTIAMDGTEGLFRGQPVLDSG-SPIRIPVGAETLG-RXINVIGEPIDERGPIPTDKTAA 491
           V      G+ GLF G+ +++SG S + +  G E +    +  +  PID+R  +  DK  +
Sbjct: 83  VNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMAPGSLENLAAPIDDRA-LSVDKHIS 141

Query: 492 IHAE 503
           + +E
Sbjct: 142 VMSE 145


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 342 TEGLFRGQPVLDSGSPIRIPVGAETLGRXINVIGEPIDE 458
           T G+  G PVL +G P+ + +G   +G   + I  P+ +
Sbjct: 59  TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 319 FGPLPWTVLKAYSVGNLYSTLAHPFVSRWELKPS 420
           FG   +TV  A    NLYS  +   VS W+LKP+
Sbjct: 168 FGSSEYTVDVACDEENLYSLTSAGVVSVWKLKPN 201


>U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam
           protein 3 protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 336 DGTEGLFRGQPV-LDSGSPIRIPVGAETLGRXINVIGEPIDE 458
           D  +G   G+P+ +D G  ++ P G E + +  N  GEP+DE
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDE 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,454,814
Number of Sequences: 27780
Number of extensions: 237046
Number of successful extensions: 617
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)