Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32102
         (307 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    20   7.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    20   7.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    20   7.9  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 218 CLRNRNCRTISYVMFCLYFNXH*STLYESPXP 123
           CL+N      SY +  +YFN   +  Y+   P
Sbjct: 98  CLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 129


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 218 CLRNRNCRTISYVMFCLYFNXH*STLYESPXP 123
           CL+N      SY +  +YFN   +  Y+   P
Sbjct: 103 CLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 134


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 218 CLRNRNCRTISYVMFCLYFNXH*STLYESPXP 123
           CL+N      SY +  +YFN   +  Y+   P
Sbjct: 103 CLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,413
Number of Sequences: 438
Number of extensions: 1096
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)