Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32098
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0085 + 25441460-25443504,25444263-25444536,25445091-25445468     28   5.1  
02_05_0381 - 28483425-28483458,28483588-28483658,28483746-284838...    28   5.1  

>05_06_0085 + 25441460-25443504,25444263-25444536,25445091-25445468
          Length = 898

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 277 NLKPLRTSLTRLDTMLRVNLFLRSPXPRAKLXNSL 381
           +L  L T L R    LR+  FL SP P +++  SL
Sbjct: 229 HLMALPTFLRRRFNRLRIGFFLHSPFPSSEIYRSL 263


>02_05_0381 -
           28483425-28483458,28483588-28483658,28483746-28483819,
           28483975-28484050,28484129-28484206,28485557-28485589
          Length = 121

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +2

Query: 74  PPTEDYPKIVRSEFDASPDGSLQLQFR 154
           PP +DY K++  ++DAS D +++L +R
Sbjct: 8   PPHKDYYKVLEVDYDAS-DDTIKLSYR 33


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,703,792
Number of Sequences: 37544
Number of extensions: 213807
Number of successful extensions: 557
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)