Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32098
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 29 2.6
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 29 2.6
Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical p... 29 2.6
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 29 2.6
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 29 2.6
Z82084-6|CAJ85781.1| 156|Caenorhabditis elegans Hypothetical pr... 27 6.0
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 27 6.0
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 27 6.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 6.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 6.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 6.0
AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 274 ANLKPLRTSLTRLDTMLRVNLFLRSPXPRAKLXNSLDR 387
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 274 ANLKPLRTSLTRLDTMLRVNLFLRSPXPRAKLXNSLDR 387
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical
protein F49E12.9a protein.
Length = 269
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 390 KSIQGIXKFSSWRRRPXE*IHPE 322
KSI+G + SW +P + IHPE
Sbjct: 242 KSIEGKRNYMSWSMKPIKQIHPE 264
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 274 ANLKPLRTSLTRLDTMLRVNLFLRSPXPRAKLXNSLDR 387
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 274 ANLKPLRTSLTRLDTMLRVNLFLRSPXPRAKLXNSLDR 387
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z82084-6|CAJ85781.1| 156|Caenorhabditis elegans Hypothetical
protein ZK1053.7 protein.
Length = 156
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 240 VRGSYSYTNTDGKPETITYF 299
++ +YSY N DG P + TY+
Sbjct: 112 IKDTYSYDNVDGTPISCTYY 131
>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical
protein R08E3.1b protein.
Length = 1465
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 105 GLNSTPAPMVAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNT 269
G N+ ++ NYN T I ++ E+K AL+ I+ V+ ++YT+T
Sbjct: 208 GANAYSDILLVINYNVST---ITDNDATEIKSALEKQRSRLYILFVQTYFNYTDT 259
>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical
protein R08E3.1a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 105 GLNSTPAPMVAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNT 269
G N+ ++ NYN T I ++ E+K AL+ I+ V+ ++YT+T
Sbjct: 208 GANAYSDILLVINYNVST---ITDNDATEIKSALEKQRSRLYILFVQTYFNYTDT 259
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 117 TPAPMVAYNYNFETSNGIVRSETGELKEALDDDNKPHVIV 236
TP P V+ ++N T N +RSE G + ++D + ++V
Sbjct: 4165 TPLPDVSCSFNGVTDNSKIRSEDGIVLIQVNDVTEEGIVV 4204
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 117 TPAPMVAYNYNFETSNGIVRSETGELKEALDDDNKPHVIV 236
TP P V+ ++N T N +RSE G + ++D + ++V
Sbjct: 4165 TPLPDVSCSFNGVTDNSKIRSEDGIVLIQVNDVTEEGIVV 4204
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 117 TPAPMVAYNYNFETSNGIVRSETGELKEALDDDNKPHVIV 236
TP P V+ ++N T N +RSE G + ++D + ++V
Sbjct: 4165 TPLPDVSCSFNGVTDNSKIRSEDGIVLIQVNDVTEEGIVV 4204
>AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical
protein C24G6.6 protein.
Length = 527
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 114 STPAPMVAYNYNFETSNGIVRSETGELKEALDDDNKP 224
+ P P A+N+N N + S TG++K + D P
Sbjct: 242 AAPIPRKAFNFNSRVENINLDSNTGKIKLTVSDRAVP 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,671,258
Number of Sequences: 27780
Number of extensions: 169394
Number of successful extensions: 497
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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