Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32097
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0309 - 23987669-23988042,23989485-23989560 51 6e-07
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 51 6e-07
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 49 2e-06
03_02_0817 + 11492699-11492774,11493605-11493978 49 2e-06
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 49 2e-06
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 46 2e-05
11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348 43 1e-04
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 42 2e-04
08_01_0121 - 963297-963743 31 0.73
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 29 1.7
03_01_0469 - 3613062-3613745,3613952-3614512,3614600-3614690,361... 27 8.9
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 50.8 bits (116), Expect = 6e-07
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Frame = +1
Query: 61 DVEXASF--AFSIYDFEXKGKIDAFNLGDLLRALNSNPXXXXXXXXXXXXXXXXXXXXXX 234
D + A F AFS++D + G I LG ++R+L NP
Sbjct: 7 DEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 235 X-FLXIYSQAKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAE 411
FL + AKK KD + E+ E +++DK++NG + D EV E
Sbjct: 67 PEFLNL--MAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 412 VTKDCMDPEDDDXMIPYAAFLKXVMA 489
+ ++ D D I Y F+K +MA
Sbjct: 125 MIREA--DVDGDGQINYEEFVKVMMA 148
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 50.8 bits (116), Expect = 6e-07
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Frame = +1
Query: 82 AFSIYDFEXKGKIDAFNLGDLLRALNSNP-XXXXXXXXXXXXXXXXXXXXXXXFLXIYSQ 258
AFS++D + G I LG ++R+L NP FL + ++
Sbjct: 16 AFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMISEVDTDSNGNIEFKEFLGLMAR 75
Query: 259 AKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPE 438
+DKD + E+ E +++DK++NG + D EV E+ +
Sbjct: 76 KLRDKD--SEEELKEAFRVFDKDQNGFISATELRHVMANIGERLTDEEVGEMISEA--DV 131
Query: 439 DDDXMIPYAAFLKXVMAWK 495
D D I Y F+K +MA K
Sbjct: 132 DGDGQINYEEFVKCMMAKK 150
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Frame = +1
Query: 61 DVEXASF--AFSIYDFEXKGKIDAFNLGDLLRALNSNP-XXXXXXXXXXXXXXXXXXXXX 231
D + A F AFS++D + G I LG ++R+L NP
Sbjct: 7 DDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 232 XXFLXIYSQAKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAE 411
FL + A+K KD + E+ E +++DK++NG + D EV E
Sbjct: 67 PEFLNL--MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 412 VTKDCMDPEDDDXMIPYAAFLKXVMA 489
+ ++ D D I Y F+K +MA
Sbjct: 125 MIREA--DVDGDGQINYEEFVKVMMA 148
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Frame = +1
Query: 61 DVEXASF--AFSIYDFEXKGKIDAFNLGDLLRALNSNP-XXXXXXXXXXXXXXXXXXXXX 231
D + A F AFS++D + G I LG ++R+L NP
Sbjct: 7 DDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 232 XXFLXIYSQAKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAE 411
FL + A+K KD + E+ E +++DK++NG + D EV E
Sbjct: 67 PEFLNL--MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 412 VTKDCMDPEDDDXMIPYAAFLKXVMA 489
+ ++ D D I Y F+K +MA
Sbjct: 125 MIREA--DVDGDGQINYEEFVKVMMA 148
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Frame = +1
Query: 61 DVEXASF--AFSIYDFEXKGKIDAFNLGDLLRALNSNP-XXXXXXXXXXXXXXXXXXXXX 231
D + A F AFS++D + G I LG ++R+L NP
Sbjct: 7 DDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 232 XXFLXIYSQAKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAE 411
FL + A+K KD + E+ E +++DK++NG + D EV E
Sbjct: 67 PEFLNL--MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEE 124
Query: 412 VTKDCMDPEDDDXMIPYAAFLKXVMA 489
+ ++ D D I Y F+K +MA
Sbjct: 125 MIREA--DVDGDGQINYDEFVKVMMA 148
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 45.6 bits (103), Expect = 2e-05
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 3/142 (2%)
Frame = +1
Query: 61 DVEXASF--AFSIYDFEXKGKIDAFNLGDLLRALNSNP-XXXXXXXXXXXXXXXXXXXXX 231
D + A F AFS++D + G I LG ++R+L NP
Sbjct: 7 DDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 232 XXFLXIYSQAKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAE 411
FL + A+K KD + E+ E +++DK++NG + D EV E
Sbjct: 67 PEFLNL--MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 412 VTKDCMDPEDDDXMIPYAAFLK 477
+ ++ D D I Y F+K
Sbjct: 125 MIREA--DVDGDGQINYEEFVK 144
>11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348
Length = 205
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 259 AKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPE 438
A+K +D GA +D E +++DK++NG + D E+A++ +
Sbjct: 79 ARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEA--DS 136
Query: 439 DDDXMIPYAAFLKXVMAWKTSQLV 510
D D I Y FLK +MA + ++
Sbjct: 137 DGDGQINYNEFLKVMMAKRRQNMM 160
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 42.3 bits (95), Expect = 2e-04
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Frame = +1
Query: 82 AFSIYDFEXKGKIDAFNLGDLLRALNSNPXXXXXXXXXXXXXXXXXXXXXXX-FLXIYSQ 258
AF+++D + G I + LG ++ +L +P FL +
Sbjct: 464 AFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLL-- 521
Query: 259 AKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPE 438
A+K +D GA +D + +++DK++NG + D E+A++ +
Sbjct: 522 ARKLRDTGAEDDIRDAFRVFDKDQNGFITPDELRHVMANLSDPLSDDELADMLHEA--DS 579
Query: 439 DDDXMIPYAAFLK 477
D D I Y FLK
Sbjct: 580 DGDGQINYNEFLK 592
>08_01_0121 - 963297-963743
Length = 148
Score = 30.7 bits (66), Expect = 0.73
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 82 AFSIYDFEXKGKIDAFNLGDLLRALNSNP 168
AFS++D + G+I LG L+R+L NP
Sbjct: 17 AFSLFDTDGDGRIAPSELGVLMRSLGGNP 45
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +1
Query: 259 AKKDKDQGAXEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPE 438
A+K KD E+ E ++ DK++NG + D EV ++ ++
Sbjct: 312 ARKMKDGDGDEELKEAFEVLDKDQNGFISPTELRTVMTNLGEKMTDEEVEQMIREA--DT 369
Query: 439 DDDXMIPYAAFL 474
D D + Y F+
Sbjct: 370 DGDGQVNYDEFV 381
>03_01_0469 -
3613062-3613745,3613952-3614512,3614600-3614690,
3614782-3614870,3614962-3615027,3615309-3615423,
3615521-3615966
Length = 683
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 499 MSSTP*XSSGMLRRGSCXHRLQGPCSPL 416
+S TP +G LR GS Q PC+PL
Sbjct: 634 ISLTPRGGAGPLRLGSTATPRQSPCAPL 661
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,792,515
Number of Sequences: 37544
Number of extensions: 183060
Number of successful extensions: 443
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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