Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32097
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   5.7  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   5.7  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   10.0 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   10.0 

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/42 (19%), Positives = 21/42 (50%)
 Frame = +1

Query: 391 DDSEVAEVTKDCMDPEDDDXMIPYAAFLKXVMAWKTSQLVIS 516
           +D+E  ++  +C    D + +I  +  L+    +KT   +++
Sbjct: 93  NDNEADQLLAECSPISDPNALIKISKILECFFKYKTINQILN 134


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/40 (20%), Positives = 21/40 (52%)
 Frame = +1

Query: 391 DDSEVAEVTKDCMDPEDDDXMIPYAAFLKXVMAWKTSQLV 510
           D++ V ++  DC    +++  +  +  ++ V  +KT + V
Sbjct: 93  DENSVKQLVSDCSTISEENPHLKASKLVQCVSKYKTMKSV 132


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 391 DDSEVAEVTKDCMDPEDDDXMIPYAAFLKXVMAWKT 498
           DD+E  ++  +C    D +  I  +   +  M +KT
Sbjct: 93  DDNETDQLIVECSPISDANVHIKISKIFQCFMKYKT 128


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 430 DPEDDDXMIPYAAFLKXVMAWKTSQLVI 513
           DP D    IPYA     +  +  + L++
Sbjct: 132 DPSDSTMAIPYAVTKSAMFFFAATSLLV 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,411
Number of Sequences: 438
Number of extensions: 1821
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)