Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32095
         (404 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104...    26   9.9  
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622...    26   9.9  

>03_05_1143 +
           30709825-30709926,30710105-30710260,30710356-30710439,
           30710769-30710882,30711019-30711111,30711888-30711977,
           30712157-30712227,30712300-30712374,30712481-30712568,
           30712748-30712806,30712893-30712956,30713030-30713095,
           30713283-30713435,30713522-30713626,30713739-30713974,
           30714104-30714173,30714286-30714339,30714501-30714557,
           30714662-30714741,30716056-30717919
          Length = 1226

 Score = 26.2 bits (55), Expect = 9.9
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -2

Query: 103 WRNSRVNSVVLERSVLS---SFGGQRHCQRQADCQ 8
           W+++ V  V+  R + S   S  GQ+ C RQ  CQ
Sbjct: 28  WKDNNVQVVIRVRPLSSGEISVQGQKRCVRQDSCQ 62


>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
            30062391-30062464,30062547-30062629,30063044-30063147,
            30063526-30063665,30063736-30063783,30063939-30063991,
            30064178-30064262,30064346-30064412,30064496-30064606,
            30065262-30065283,30066244-30071110,30071186-30071374,
            30071463-30071577,30072329-30073388,30074247-30074694,
            30074966-30075019,30075105-30076898,30076989-30077949,
            30078271-30078384,30078459-30078613,30078934-30079026,
            30079341-30079613,30093423-30093975,30094465-30094540,
            30094619-30094718
          Length = 4025

 Score = 26.2 bits (55), Expect = 9.9
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 296  EDLXKYLGDAYKGSXIVPLP 355
            E L KY+ +AY+GS ++P P
Sbjct: 1233 EALKKYVYNAYEGSFVLPAP 1252


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,572,161
Number of Sequences: 37544
Number of extensions: 122084
Number of successful extensions: 376
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)