Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32093
         (309 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Re...    61   5e-09
UniRef50_Q9XUN9 Cluster: Troponin I 3; n=6; Caenorhabditis|Rep: ...    40   0.008
UniRef50_Q31E58 Cluster: Putative uncharacterized protein precur...    31   3.8  
UniRef50_A0RYW2 Cluster: RNA-binding protein; n=1; Cenarchaeum s...    31   3.8  
UniRef50_A0L4V1 Cluster: TonB family protein; n=1; Magnetococcus...    31   6.6  
UniRef50_A4D9J7 Cluster: Putative uncharacterized protein; n=2; ...    31   6.6  
UniRef50_UPI0000E4A347 Cluster: PREDICTED: similar to RP11-100C1...    30   8.8  
UniRef50_Q7Z2R3 Cluster: MST148 protein; n=1; Homo sapiens|Rep: ...    30   8.8  

>UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Rep:
           Troponin I - Drosophila melanogaster (Fruit fly)
          Length = 269

 Score = 60.9 bits (141), Expect = 5e-09
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = +2

Query: 62  NTTTMAVDEAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
           N   +  +EAKKAKQAEI+RKRAEVRKRMEEAS       GFMTP
Sbjct: 58  NDPKVKAEEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTP 102


>UniRef50_Q9XUN9 Cluster: Troponin I 3; n=6; Caenorhabditis|Rep:
           Troponin I 3 - Caenorhabditis elegans
          Length = 260

 Score = 40.3 bits (90), Expect = 0.008
 Identities = 20/38 (52%), Positives = 27/38 (71%)
 Frame = +2

Query: 83  DEAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
           D A+KA++ E+  K+AEVRKRMEEA+       GF+TP
Sbjct: 20  DAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFLTP 55


>UniRef50_Q31E58 Cluster: Putative uncharacterized protein
           precursor; n=1; Thiomicrospira crunogena XCL-2|Rep:
           Putative uncharacterized protein precursor -
           Thiomicrospira crunogena (strain XCL-2)
          Length = 582

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 51  HPKPTQQQWRLMKRRRPNRPKSTASALRCASAW 149
           HPKPTQQ W +++ R  + P +  +  +    W
Sbjct: 382 HPKPTQQYWPIIQTRLQSHPDTIPTDTKSILGW 414


>UniRef50_A0RYW2 Cluster: RNA-binding protein; n=1; Cenarchaeum
           symbiosum|Rep: RNA-binding protein - Cenarchaeum
           symbiosum
          Length = 631

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 68  TTMAVDEAKKAKQAEIDRKRAEVRKRMEE 154
           T + +D  +KA+  E D+K AEV+ RM+E
Sbjct: 267 TRIILDSGRKARSGEADKKIAEVQARMDE 295


>UniRef50_A0L4V1 Cluster: TonB family protein; n=1; Magnetococcus
           sp. MC-1|Rep: TonB family protein - Magnetococcus sp.
           (strain MC-1)
          Length = 335

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 83  DEAKKAKQAEIDRKRAEVRKRMEE 154
           +EA K KQAE  RK+ E RK+ EE
Sbjct: 159 EEAAKKKQAEEQRKKEEARKQAEE 182


>UniRef50_A4D9J7 Cluster: Putative uncharacterized protein; n=2;
           Trichocomaceae|Rep: Putative uncharacterized protein -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 1929

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 62  NTTTMAVDEAKKAKQAEIDRKRAEVRKRM 148
           NTT+   D+ KK K+ E DRKR E  +R+
Sbjct: 261 NTTSSKKDKKKKKKEEEEDRKRKEEEERV 289


>UniRef50_UPI0000E4A347 Cluster: PREDICTED: similar to RP11-100C15.2;
            n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
            similar to RP11-100C15.2 - Strongylocentrotus purpuratus
          Length = 1964

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +2

Query: 92   KKAKQAEIDRKRAEVRKRMEEA 157
            K +++AE +RKR E+RK+ EEA
Sbjct: 1559 KASREAEAERKREELRKKQEEA 1580


>UniRef50_Q7Z2R3 Cluster: MST148 protein; n=1; Homo sapiens|Rep:
           MST148 protein - Homo sapiens (Human)
          Length = 157

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = +3

Query: 42  AVGHPKPTQQQWRLMKRRRPNRPKSTASA 128
           A G PKPT+  WR   R RP RP   A A
Sbjct: 108 APGAPKPTRPSWRTPTRARP-RPSPPAGA 135


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,426,613
Number of Sequences: 1657284
Number of extensions: 2071010
Number of successful extensions: 8129
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8122
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)