Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32093
         (309 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238     27   4.0  
01_07_0265 + 42404297-42404479,42404544-42404723,42404811-42405440     27   4.0  
03_05_0195 - 21822418-21822441,21822480-21822659,21823337-218234...    26   5.2  
10_06_0140 + 11147019-11147791,11148301-11150524                       26   6.9  
05_04_0225 + 19209957-19210047,19210067-19210128,19210686-192107...    25   9.2  
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970...    25   9.2  
02_05_0664 + 30717551-30719491                                         25   9.2  

>05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238
          Length = 490

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 59  TNTTTMAVDEAKKAKQAEIDRKRAEVRKRMEEA 157
           T  +  A  E +  +Q  + RK+AE +K MEEA
Sbjct: 425 TKASQEAFREQQGLRQEALQRKKAEKKKLMEEA 457


>01_07_0265 + 42404297-42404479,42404544-42404723,42404811-42405440
          Length = 330

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 77  AVDEAKKAKQAEIDRKRAEVRKRME 151
           AVD  +KAK A +DR   E++++ME
Sbjct: 50  AVDRERKAKLALLDRLVGEMQRQME 74


>03_05_0195 -
           21822418-21822441,21822480-21822659,21823337-21823453,
           21824347-21824412,21825592-21825683,21825924-21825987,
           21826098-21826176,21826248-21826387,21827253-21827334,
           21827565-21827572,21828005-21828103,21828208-21828285,
           21828379-21828472,21828726-21828823,21830299-21830502
          Length = 474

 Score = 26.2 bits (55), Expect = 5.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 91  RFINRHCCCVGLGCPTARIRRWP 23
           R  +R CCCV +  P AR R  P
Sbjct: 44  RSSSRRCCCVPVPAPGARSRGLP 66


>10_06_0140 + 11147019-11147791,11148301-11150524
          Length = 998

 Score = 25.8 bits (54), Expect = 6.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 33  LILAVGHPKPTQQQWRLMKRRRPNRPK 113
           ++L  G  +  ++QW+   RR P RPK
Sbjct: 873 IVLDDGVRETAKEQWKDAARRHPKRPK 899


>05_04_0225 +
           19209957-19210047,19210067-19210128,19210686-19210720,
           19211859-19211938,19212276-19212359,19212575-19212683,
           19213306-19213444
          Length = 199

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 88  FINRHCCCVGLGCPTARIRRWPY 20
           F+N    C+G GCP + ++R P+
Sbjct: 80  FVNE-LLCIGTGCPYSCVKRAPH 101


>03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,
            9700145-9700235,9700698-9700759,9701256-9702962,
            9703789-9703870,9703972-9704057,9704855-9704968,
            9705113-9705163,9705261-9705358,9707084-9707546
          Length = 1367

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 11   NHLVGPSSNSCSRTP*TNTTTMAVDEAKKAKQAEI 115
            +H+V PS         T TTT  VDE ++AK  E+
Sbjct: 979  SHIVRPSLTPNLGPLDTTTTTRNVDERREAKLGEM 1013


>02_05_0664 + 30717551-30719491
          Length = 646

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 54 PKPTQQQWRLMKRRR 98
          P+PT  QW +++RRR
Sbjct: 27 PRPTHLQWGVLRRRR 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,482,890
Number of Sequences: 37544
Number of extensions: 65884
Number of successful extensions: 275
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)