Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32093
(309 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 42 1e-04
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 42 1e-04
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 40 3e-04
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 40 3e-04
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 38 0.002
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 38 0.002
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 31 0.12
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 31 0.12
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 26 6.2
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 26 6.2
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 26 6.2
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 26 6.2
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 26 6.2
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 26 6.2
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 26 6.2
Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical p... 25 8.1
Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical p... 25 8.1
Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical p... 25 8.1
Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical p... 25 8.1
X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein. 25 8.1
AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical ... 25 8.1
AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical ... 25 8.1
AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical ... 25 8.1
AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical ... 25 8.1
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +2
Query: 80 VDEAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
VD + K AE +RK+ EVRKR+EEAS GF+TP
Sbjct: 4 VDADEARKMAERERKKEEVRKRLEEASRMKKAKKGFLTP 42
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +2
Query: 80 VDEAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
VD + K AE +RK+ EVRKR+EEAS GF+TP
Sbjct: 4 VDADEARKMAERERKKEEVRKRLEEASRMKKAKKGFLTP 42
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 40.3 bits (90), Expect = 3e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 83 DEAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
D A+KA++ E+ K+AEVRKRMEEA+ GF+TP
Sbjct: 20 DAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFLTP 55
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 40.3 bits (90), Expect = 3e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 83 DEAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
D A+KA++ E+ K+AEVRKRMEEA+ GF+TP
Sbjct: 20 DAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFLTP 55
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 86 EAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
E + K AE + K+AEVRKR+EEA GF+TP
Sbjct: 7 EDAQRKAAEREAKKAEVRKRLEEAGNKKKAKKGFLTP 43
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 86 EAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
E + K AE + K+AEVRKR+EEA GF+TP
Sbjct: 7 EDAQRKAAEREAKKAEVRKRLEEAGNKKKAKKGFLTP 43
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.12
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 86 EAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
E + K E + K+AEVRKR+EEA GF+TP
Sbjct: 20 EDAQRKAQEREAKKAEVRKRLEEAG-QKKQKKGFLTP 55
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.12
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 86 EAKKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTP 196
E + K E + K+AEVRKR+EEA GF+TP
Sbjct: 20 EDAQRKAQEREAKKAEVRKRLEEAG-QKKQKKGFLTP 55
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1338 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1365
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1350 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1377
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1237 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1264
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1319 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1346
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1338 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1365
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1350 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1377
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1237 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1264
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1319 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1346
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/27 (48%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
Frame = +2
Query: 83 DEAKKAK--QAEIDRKRAEVRKRMEEA 157
++AKKAK Q +ID+ AEV++R E++
Sbjct: 1084 EDAKKAKEDQEKIDKLAAEVKEREEKS 1110
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1350 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1377
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1350 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1377
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKR 145
NT + + K+ KQ E DR+RAE ++
Sbjct: 1350 NTMQVLIQNWKRQKQEEEDRRRAEEEEK 1377
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 86 EAKKAKQAEIDRKRAEVRKRMEEAS 160
EAKK + E +R + E ++R+EEA+
Sbjct: 494 EAKKKAEQEKERAKREEQRRIEEAA 518
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 86 EAKKAKQAEIDRKRAEVRKRMEEAS 160
EAKK + E +R + E ++R+EEA+
Sbjct: 494 EAKKKAEQEKERAKREEQRRIEEAA 518
>Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical
protein F46B3.17 protein.
Length = 740
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 62 NTTTMAVDEAKKAKQAEIDRKRAEVRKRMEEAS 160
N +AV+ +A +ID K +E+R+ ++AS
Sbjct: 406 NLAYLAVEAQSQAMGHQIDLKASEIRRTQQKAS 438
>Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 67 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 111
>Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 113
>Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 67 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 111
>Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 113
>X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein.
Length = 438
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 113
>AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 67 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 111
>AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 113
>AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 67 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 111
>AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PSSNSCSRTP*TNTTTMAVDEAKKAKQA--EIDRKRAEVRKRMEE 154
PSS S TP T + A D+ K+ ++ E+ K AE E+
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEEVAKELIEKEAEYEGEYED 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,216,647
Number of Sequences: 27780
Number of extensions: 47587
Number of successful extensions: 278
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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