Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32088
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   1.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.1  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 112 YHHDGTCWASRDD 74
           Y +DGT W S DD
Sbjct: 306 YKYDGTNWVSYDD 318


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 62  RPWWQHATIVKRVRNSKS 9
           RPWW+    V  + N++S
Sbjct: 72  RPWWERYQPVSYILNTRS 89


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 62  RPWWQHATIVKRVRNSKS 9
           RPWW+    V  + N++S
Sbjct: 73  RPWWERYQPVSYILNTRS 90


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 62  RPWWQHATIVKRVRNSKS 9
           RPWW+    V  + N++S
Sbjct: 73  RPWWERYQPVSYILNTRS 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,136
Number of Sequences: 336
Number of extensions: 1917
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)