Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32088
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 4.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.7
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 21 7.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.5
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 248 NDYENAGTREMFGTYSYALXIPLP 319
N+Y N ++++ +Y IP+P
Sbjct: 316 NNYNNYNNKKLYYNINYIEQIPVP 339
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 55 HGRSHKCRHERPSKCRHGGKLGCKGGR 135
H R RHE + R+ G+ C R
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDR 257
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 55 HGRSHKCRHERPSKCRHGGKLGCKGGR 135
H R RHE + R+ G+ C R
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDR 257
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 55 HGRSHKCRHERPSKCRHGGKLGCKGGR 135
H R RHE + R+ G+ C R
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDR 257
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 55 HGRSHKCRHERPSKCRHGGKLGCKGGR 135
H R RHE + R+ G+ C R
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDR 257
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 55 HGRSHKCRHERPSKCRHGGKLGCKGGR 135
H R RHE + R+ G+ C R
Sbjct: 231 HSRYEDLRHEDRNSYRNDGERSCSRDR 257
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 55 HGRSHKCRHERPSKCRHGGKLGCKGGR 135
H R RHE + R+ G+ C R
Sbjct: 231 HSRYEDSRHEDGNSYRNDGERSCSRDR 257
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 55 HGRSHKCRHERPSKCRHGGKLGCKGGR 135
H R RHE + R+ G+ C R
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDR 257
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 55 HGRSHKCRHERPSKCRHGGKLGCKGGR 135
H R RHE + R+ G+ C R
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDR 257
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/29 (24%), Positives = 14/29 (48%)
Frame = -3
Query: 163 FLEAGALMTTCPLCSRVYHHDGTCWASRD 77
+++ L + C + + HDG WA +
Sbjct: 6 YVDKQLLASRCVTKAAIAGHDGNLWAKSE 34
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 7.5
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -2
Query: 68 WERPWWQH 45
+E PWW H
Sbjct: 522 YEYPWWSH 529
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 7.5
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -2
Query: 68 WERPWWQH 45
+E PWW H
Sbjct: 575 YEYPWWSH 582
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 86 GPASAVMVVNSAAKGAGG 139
GP +AV AA G GG
Sbjct: 561 GPVAAVAAAAVAAAGVGG 578
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,950
Number of Sequences: 438
Number of extensions: 2682
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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